Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0404 ATGGATTTCAGAGTGATGGGTTTGGAGTCTCCCTTGTTCCACACGCTGCACCGCATGATGGACACGTCGGAGGAAGGTGCAGGGGACAAGACACACAATGCTCCGACACAGACATACGTTCGAGACGCGAAAGCGATGGCTGCTACACCTGCGGATGTGAAGGAATATCCAAATTCCTACGTGTTCCAGATCGACATGCCGGGTTTGAAATCTGGTGACATAAAGGTTCAAATTGAAGATGATAACGTGCTTTTGATTAGCGGGGAGAGAAAGAGAGAAGAAGAAAAAGAAGGGGTGAATTTTCTGAGAATGGAACGAAGGGTTGGGAAGTTCATGCGGAAGTTTGTGTTACCTGAAAATGCAAACACTGATGCAATCTCTGCTGTGTGTCAAGATGGGGTGCTCAGCGTTACCGTGCAGAAATTGCCTCCTCCTGAACCTAAGAAGCCAAGGACTATTCAGGTCAAAGTTGCTTGA 477 0.4759 MDFRVMGLESPLFHTLHRMMDTSEEGAGDKTHNAPTQTYVRDAKAMAATPADVKEYPNSYVFQIDMPGLKSGDIKVQIEDDNVLLISGERKREEEKEGVNFLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0404 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 157 - -
Pvu1g0404 158 Gene3D - 5 157 IPR008978 -
Pvu1g0404 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 157 - -
Pvu1g0404 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Pvu1g0404 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 156 IPR002068 -
Pvu1g0404 158 SUPERFAMILY HSP20-like chaperones 33 150 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0404 Pvu-Chr1 4062998 4063845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0404 K13993 - gmx:100813195 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0404 1 4062998 4063845 Pvu1g0404 1 4062998 4063845 ECH