Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0374 ATGGAGATCATCACTGCAGAGCTACTAGTATTTGTTGTAGTTCCTTTTCTGCTAAACTGTGGAAATGGAATTGAAGCATTATCCACACATAGCATCAATTATAGAGCAACAACAAAGCAACCTTATCGAACTTCTTATCACTTTCAGCCCCAAGAGAATTGGATGAACGATCCAAATGGGCCTATGTACTACAAAGGTGTTTACCACCTTTTCTACCAGCATAACCCTGAAGCAGCAACCTTTGGTGATAGGATTGTATGGGGTCATTCAGTATCCTATGATCTTATCAATTGGATTCATTTGAATAATGCTATTGAACCAAGTGGACCATATGATATTAATAGCTGTTGGTCAGGCTCAGCCACTATAATCCCTGGGAAAGAACAGCCTATGATTTTGTACACGGGAATTGACTATAAGAAACATCAAGTTCAGAACTTAGCTGTGCCAAGGAATCTATCTGACACCTTCTTAAGGGAATGGGTGAAACACTCTAAGAACCCTGTCATGACTCCACCAAGTGGAGTTGAAGTTGATAATTTCAGAGACCCTTCAACTGCTTGGAAGGGAAAGGATGGGAAATGGAGGGTAGTAGTTGGTGCTCAAAAGGGTGATGAAGGGAAGGCAATTCTCCACCAAAGTGAGGATTTTGTTAATTGGACAGTGGACCCTAATCCCTTTTATGCATCACAAAATACTGGAGTTTGTGAGTGTCCAGACTTTTTCCCTGTATACATGAATGGCAGCACAAATGGGGTGGATACATCTGTGCAAAATCCAAGTGTTAGACATGTCTTGAAGATAAGCTACCTACGCAAGCAGCATGATTACTATTTTCTTGGTAAATATGCATCTGATCAGGAAAACTTCATTCCTGATGTCAGGTTTACAGGGACTAGTTCAGACTTGAGGTATGACTATGGTAAATTCTATGCTTCCAAGTCATTTTTTGACTATGCCAAGAACAGGAGAATATTGTGGGGATGGGTAAACGAGTCTGACTCCACACAAGATGACATGGACAAAGGATGGGCTGGTCTACAGTCAATTCCAAGGCAAGTTTGGCTAGATAAAAGTGGGAAGCGATTGGTTCAGTGGCCACTTGAAGAGGTAGAACAGCTACGTGGCAAGCACATAAGAATAACGGGGGAGAACCTTGTGCATGGATCACATCTTGAAGTCTCGGGTATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTACCTGAACTAGAAAAGGCAGAGTTTCTTGATCCAAATGGAGTTGATCCCCAACTACTTTGTAGCCAAGAATATGAATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTGGCTTCAAAGGATCTCAAAGAGCACACTGCAGTCTTCTTCACAATATATAGAGCACCCAATAGATATGTATGCCTCATGTGCAGTGACCAAAGCAGGTCCTCATTGAGGCATGACCTTGACAAAACTACATATGGAACTATCTTTGATCTAGATCCCAATCTAAAAAAGATTTCACTAAGAAGCTTGATTGACCACTCCATTATTGAGAGTTTTGGTGATGAAGGGAGAGTTTGCATCACTAGCAGAGTTTATCCATCATTGGCTATAGACAAAGATGCTCATCTTTGTGTATTTAACTATGGAAGCCAGAGTGTGTTGATCTCAAAACTGAACGCTTGGAGCATGAAACAAGCAGAGATTGGCTATGAGGGAAACATAAGCTATACCTAA 1737 0.4134 MEIITAELLVFVVVPFLLNCGNGIEALSTHSINYRATTKQPYRTSYHFQPQENWMNDPNGPMYYKGVYHLFYQHNPEAATFGDRIVWGHSVSYDLINWIHLNNAIEPSGPYDINSCWSGSATIIPGKEQPMILYTGIDYKKHQVQNLAVPRNLSDTFLREWVKHSKNPVMTPPSGVEVDNFRDPSTAWKGKDGKWRVVVGAQKGDEGKAILHQSEDFVNWTVDPNPFYASQNTGVCECPDFFPVYMNGSTNGVDTSVQNPSVRHVLKISYLRKQHDYYFLGKYASDQENFIPDVRFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDSTQDDMDKGWAGLQSIPRQVWLDKSGKRLVQWPLEEVEQLRGKHIRITGENLVHGSHLEVSGITASQADVEVLFELPELEKAEFLDPNGVDPQLLCSQEYESRSGIIGPFGLLALASKDLKEHTAVFFTIYRAPNRYVCLMCSDQSRSSLRHDLDKTTYGTIFDLDPNLKKISLRSLIDHSIIESFGDEGRVCITSRVYPSLAIDKDAHLCVFNYGSQSVLISKLNAWSMKQAEIGYEGNISYT* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0374 578 ProSitePatterns Glycosyl hydrolases family 32 active site. 47 60 IPR018053 GO:0004553|GO:0005975
Pvu1g0374 578 CDD GH32_Fruct1-like 53 356 - -
Pvu1g0374 578 Pfam Glycosyl hydrolases family 32 C terminal 370 563 IPR013189 -
Pvu1g0374 578 Gene3D Glycosyl hydrolase domain; family 43 52 379 IPR023296 -
Pvu1g0374 578 SMART glyco_32 47 524 IPR001362 GO:0004553|GO:0005975
Pvu1g0374 578 SUPERFAMILY Concanavalin A-like lectins/glucanases 367 566 IPR013320 -
Pvu1g0374 578 Pfam Glycosyl hydrolases family 32 N-terminal domain 47 367 IPR013148 -
Pvu1g0374 578 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 36 571 - -
Pvu1g0374 578 SUPERFAMILY Arabinanase/levansucrase/invertase 38 367 IPR023296 -
Pvu1g0374 578 Gene3D - 380 564 - -
Pvu1g0374 578 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 36 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0374 Pvu-Chr1 3535723 3538957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0374 57 569 Glycoside Hydrolase AT1G55120 55.258 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0374 K01193 - gmx:100777487 1063.52