Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0373 ATGGAGATCAGTGGAGAGGTAGCATCCTCACACAACCTCAATTCTACCATGTATAAGGTACCTCAGAAACAACCTTATAGAACTTGGTACCACTTTCAACCCCCTCAATGTTGGATGAATGATCCAAATGCACCAATGTACTACAAAGGAGTTTACCACTTTTTCTACCAGCATAATCCTCATGCAGCAACCTTCGGTGAGAAAATGGTGTGGGCTCACTCTGTGTCCTATGATCTCATCAACTGGATTCATCTGGACCATGCTATTGAGCCAAGTGAACAGTTTGACTTCAACGGTTGTTGGTCAGGCTCAGCCACTATAATCCCAGGCAAAGAAAAACCTGTGATTTTGTACACAGGAATTGATGATAAAAAACACCAAGTTCAAAACATAGCTATGCCAAAGAATCCATCAGACCCCTTCTTAAGGGAATGGGTGAAACACCCTCAAAACCCTGTCATGACTCCACCAAGTGGAGTTGAAGTTGATAATTTCAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGGTAGTTCTTTACCAAAGTGAGGATTTTGCTAATTGGACAGTGGAATTGAAACCTTTTTTTGCATCAGATAATACTGGAGTTTGTGAGTGTCCAGATTTTTTTCCTGTGTCCATCAATAGTACAAATGGGGTGGATACATCTGTTCAAAATCAAAGTGTTAGACATGTATTAAAGATAAGCTATCTACGGTTACATCAGGACTATTATTTTCTTGGTAAGTATGCCAATGAAGATGGAAACTTTACTCCTGATGTTAAATTCACAGGAACTAGTTTGGACTTAAGGTTAGACTATGGTAAATTTTATGCTTCAAAGTCATTTTTTGACCATGCTAAGAGCAGAAGGATATTATGGGGGTGGGTGGAGGAGTGTGACACTAGCCATGATGACATTGAGAAAGGATGGGCTGGTCTTCAGTGTATTCCAAGACAAGTTTGGCTTGATGAAAGTGGAAACAGGCTAATGCAATGGCCAATTGAAGAGATAGAAACACTACGTGACAAACACATTAGCATAGTGGGAGAGAAACTGGTTGGTGGATCAATTCTTGAAATCTCAGGTATCACTGCATCACAGGCTGATGTAGAAGTGTTGTTTGAGCTACCAGAACTAGAGAATGCAGAGTGGCTAGAAGAAAGTGAAGTTGATCCTCGAGTATTGTGTAGTGAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCATCTGAAGACCAAACAGAACACACTGCAATCTTCTTCAGAATATATAAAACCTCCAATAGATATGTATGTTTCATGTGCAGTGACCAAAGCAGGTCTTCATTGAGGCAGGACCTTGATAAAACCACAGATGGAACTATCTTTGACATAGACCCTAATCAAAAAACAATTTCACTCAGAAGCTTGATTGATCGGTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATTACCAGTAGAGTTTATCCCTCGTTGGCTATTGACAAAGATGCTCATCTTTATGTATTCAACAATGGAAGGCAGAGTGTGGTCATCTCAGAACTGAATGCTTGGAGCATGAAGCATGCAGAATTTGGCCAAGAGGAAAGCATACATAAGCAGTAG 1686 0.4057 MEISGEVASSHNLNSTMYKVPQKQPYRTWYHFQPPQCWMNDPNAPMYYKGVYHFFYQHNPHAATFGEKMVWAHSVSYDLINWIHLDHAIEPSEQFDFNGCWSGSATIIPGKEKPVILYTGIDDKKHQVQNIAMPKNPSDPFLREWVKHPQNPVMTPPSGVEVDNFRDPSTAWQGKDGKWRVVIGAQNGDEGKVVLYQSEDFANWTVELKPFFASDNTGVCECPDFFPVSINSTNGVDTSVQNQSVRHVLKISYLRLHQDYYFLGKYANEDGNFTPDVKFTGTSLDLRLDYGKFYASKSFFDHAKSRRILWGWVEECDTSHDDIEKGWAGLQCIPRQVWLDESGNRLMQWPIEEIETLRDKHISIVGEKLVGGSILEISGITASQADVEVLFELPELENAEWLEESEVDPRVLCSEEYASRSGIIGPFGLLALASEDQTEHTAIFFRIYKTSNRYVCFMCSDQSRSSLRQDLDKTTDGTIFDIDPNQKTISLRSLIDRSIIESFGEKGRICITSRVYPSLAIDKDAHLYVFNNGRQSVVISELNAWSMKHAEFGQEESIHKQ* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0373 561 CDD GH32_Fruct1-like 38 339 - -
Pvu1g0373 561 Gene3D Glycosyl hydrolase domain; family 43 36 362 IPR023296 -
Pvu1g0373 561 SMART glyco_32 31 507 IPR001362 GO:0004553|GO:0005975
Pvu1g0373 561 ProSitePatterns Glycosyl hydrolases family 32 active site. 31 44 IPR018053 GO:0004553|GO:0005975
Pvu1g0373 561 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 20 556 - -
Pvu1g0373 561 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 20 556 - -
Pvu1g0373 561 SUPERFAMILY Arabinanase/levansucrase/invertase 22 351 IPR023296 -
Pvu1g0373 561 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 350 IPR013148 -
Pvu1g0373 561 Pfam Glycosyl hydrolases family 32 C terminal 353 546 IPR013189 -
Pvu1g0373 561 SUPERFAMILY Concanavalin A-like lectins/glucanases 350 549 IPR013320 -
Pvu1g0373 561 Gene3D - 363 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0373 Pvu-Chr1 3529465 3532477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0373 41 552 Glycoside Hydrolase AT1G55120 54.598 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0373 - K01193 gmx:100806220 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0373 1 3529465 3532477 Pvu1g0373 1 3529465 3532477 ECH