Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0372 ATGGAGACCAAAGCATCACTTGACAGCATCAATTCAAACAAGTACATGGTACCTCAAAAACAGCCTTACCGAACCTGGTACCACTTTCAGCCCCCACAAAATTGGATGAATGATCCAAATGGACCAATGTACTACAAAGGAGTTTACCACTTTTTCTACCAATTCAACCCTTATGCACCAACCTTTGGTAGGCATATGGTATGGGGTCATTCAGTATCCTATGATCTCATCAATTGGATTCATCTAAATCATGCTATTGAACCAAGTGAGTCCTATGACATCAATGGCTGCTACTCTGGCTCAATCACAATCCTCCCGGGGGAAAAACCTATCATTATGTATACAGGGAGTGATTCTAACAAACATCAAGTTCAGAACTTGGCTGTGCCAAAGAATCTATCAGACACCTTCTTAAGGGAATGGGAGAAACACCCTCAAAACCCTATCTTGATTCCACCTAGTGGAGTTGAAGTGGATGGTTTTAGAGACCCTACAACTGCTTGGCAAGGAAGTGATGGCAAATGGAGAATGATTATTGGTGCCAAAAATGGTGATGAAGGGAAGGCTCTTCTCTACCACAGTGAGGATTTCGTTAATTGGAAACCGTTTCCTAATCCTATGTATGCATCAGAAAATACTGGGATGTTTGAGTGTCCAGATTTTTTTCCTGTGTACATCAGTGGCACAAAGAATGGGGTGGATACATCTGTCCAAAACAGCAGTGTCAAGCATGTCTTGAAAACGAGCTATCAGAACAAACAACTAGAATACTATTTTGTAGGTGACTATTTCCCTGATCAGGAAAAGTTTGTTCCTGATGATGATTTGGGAGGACCTAATCTGACCTTAATATTGGACCATGGAAGCTTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAAAACAGAAGGATATTGTGGGGATGGTCACAGGAGTGTGACACTACACAAGATGATAATGAGAAAGGATGGGCTGGTCTACAGAGCATTCCAAGGCAAGTTTGGCTTGATGCAAGTGGGAAGATGTTGATGCAGTGGCCAATTGAAGAGGTAGAAAAACTACGTGACAATCAAATTAGCATAAAGGGTGAGAAACTGGCTGGTGGATCAATTCTTGAAGTCTCAGGTATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTTCCAGAACTAGAGAATGCAGAGTTTATAGATGAAAGTGAAGTTGATCCTCACTTATTGTGTAGTGAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCATCTGAGGACCAAACAGAACACACTGCAATCTTCTTCAGAATATATAGAGCTCCCAATAGATTTGTGTGTCTCATGTGCAGTGACCACAGAAGGTCTTCATTGCGGCAGAACCTTGAGAAATCCTCATATAGAACCATCTTTGACATAGACCCCAAGCAAAAAACAATTTCACTCAGATGCTTGATTGATCGCTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATTACCAGCAGAGTTTATCCCTCGTTGGCTATTGACAAAGATGCTCATCTTTATGTATTCAACAATGGAAGGCAGAGTGTGGTCATCTCAGAACTGAATGCTTGGAGCATGAAGCAAGCAGAATTTGGCCAAGAACAAAGTATAAAATAA 1671 0.4117 METKASLDSINSNKYMVPQKQPYRTWYHFQPPQNWMNDPNGPMYYKGVYHFFYQFNPYAPTFGRHMVWGHSVSYDLINWIHLNHAIEPSESYDINGCYSGSITILPGEKPIIMYTGSDSNKHQVQNLAVPKNLSDTFLREWEKHPQNPILIPPSGVEVDGFRDPTTAWQGSDGKWRMIIGAKNGDEGKALLYHSEDFVNWKPFPNPMYASENTGMFECPDFFPVYISGTKNGVDTSVQNSSVKHVLKTSYQNKQLEYYFVGDYFPDQEKFVPDDDLGGPNLTLILDHGSFYASKSFFDYAKNRRILWGWSQECDTTQDDNEKGWAGLQSIPRQVWLDASGKMLMQWPIEEVEKLRDNQISIKGEKLAGGSILEVSGITASQADVEVLFELPELENAEFIDESEVDPHLLCSEEYASRSGIIGPFGLLALASEDQTEHTAIFFRIYRAPNRFVCLMCSDHRRSSLRQNLEKSSYRTIFDIDPKQKTISLRCLIDRSIIESFGEKGRICITSRVYPSLAIDKDAHLYVFNNGRQSVVISELNAWSMKQAEFGQEQSIK* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0372 556 Gene3D - 360 544 - -
Pvu1g0372 556 SMART glyco_32 28 504 IPR001362 GO:0004553|GO:0005975
Pvu1g0372 556 SUPERFAMILY Concanavalin A-like lectins/glucanases 347 546 IPR013320 -
Pvu1g0372 556 Pfam Glycosyl hydrolases family 32 N-terminal domain 28 347 IPR013148 -
Pvu1g0372 556 CDD GH32_Fruct1-like 34 336 - -
Pvu1g0372 556 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 15 553 - -
Pvu1g0372 556 ProSitePatterns Glycosyl hydrolases family 32 active site. 28 41 IPR018053 GO:0004553|GO:0005975
Pvu1g0372 556 SUPERFAMILY Arabinanase/levansucrase/invertase 19 348 IPR023296 -
Pvu1g0372 556 Pfam Glycosyl hydrolases family 32 C terminal 350 543 IPR013189 -
Pvu1g0372 556 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 15 553 - -
Pvu1g0372 556 Gene3D Glycosyl hydrolase domain; family 43 33 359 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0372 Pvu-Chr1 3524214 3527348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0372 43 549 Glycoside Hydrolase AT5G11920 54.971 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0372 K01193 - gmx:100806753 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0372 1 3524214 3527348 Pvu1g0372 1 3524214 3527348 ECH