Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0368 ATGGACCCTCCCGCACCCTACATTTCCTCCTCCGACCTTCGCACCCACAACAAACCCCACGACGCTTGGATCTCAATCCACGGCAAAATCTACGATGTCTCCTCCTGGCTCCACCGCCACCCAGGCGGCACTCTCCCGCTTCTCACCGTCGCCGGCACTGACGCCACCGACGCCTTCCTCGCCTTCCACCCCCCCTCCGCCGCCGCCCTCCTCCCCACATTTGCCACCGGCGTCCTCCTCTCCGACTACGCCGTCTCCCCCGCCTCCTCTGACTACCGCCAGCTCCTCTCCAAGCTCTCCGATCTCAAGCTCTTCGAACGCAAGGGCCACACCACCCTCATCTTGCTCTCCATCATCCTCACCCTCCTCCCTCTCTGCGTCTGCGGCGTCGTCTTCTCCGACAGCACGTGCGTGCACCTGCTCTCCGCCGCCTTGATCGGAATCCTCTGGATTCAGAGCGGCTGGATTGGCCATGACTCGGGCCACTACAACGTCATGCTCAACCGCCGCTTCAACCGCGTCGCGCAGATCCTTTCCGGCAACGTTCTCGCCGGAATCAGCATTGCCTGGTGGAAGTGGAACCACAATGCGCACCACATTGCGTGCAACAGCCTCGACTTCGACCCCGATCTTCAGCACCTGCCATTCTTCGTCGTCTCCTCGAGGTTCTTCAACTCCCTCACTTCCAGATTCTACGATAGAAAGCTTATTTTCGATTCCCTCGCTAGGTTTTTGGTCAGTTATCAGCACTGGACTTACTACCCTGTCATGTGCTTCGCGAGGATTAACCTTTTTGCTCAGTCTTTTTTCCTTTTGTTCTCCAAGAGAAAGGTGGAGCACAGAGGAGTTGAGCTTTTAGGGTTGCTTGCGTTTTGGGTTTGGTACCCTTTGTTGGTCTCCTTCTTGCCTAATTGGTGGGAGAGGATTTTGTTCGTTGTGACAAGCTTTTCTGTGACGGGTATTCAGCATGTGCAGTTCTGCTTAAACCATTTCTCTTCCAAAGTTTACCTTGGTCCTCCAAGTGGTGATGATTGGTTTGAGAAGCAGACTAATGGGACTCTTGATGTGAGCTGTTCTGCGTGGATGGACTGGTTTCATGGTGGCCTGCAGTTTCAGGTGGAGCACCATTTGTTTCCCCGGCTCCCGCGCTGCCATCTGAGGAAGATCGCGCCCTTGGTTAAGGATCTTTGCAAGAAGCATAACCTTCCTTACAATTGTGTGTCCTTTTGGAAGGCCAATGTGCTGACGATTCAGACACTGCGAAAGGCAGCGTTGCAGGCCAGGGATGGATCTGGGCCGGTTCCCAAGAATTTGGTTTGGGAGGCTGTTAATACCCATGGATGA 1344 0.5506 MDPPAPYISSSDLRTHNKPHDAWISIHGKIYDVSSWLHRHPGGTLPLLTVAGTDATDAFLAFHPPSAAALLPTFATGVLLSDYAVSPASSDYRQLLSKLSDLKLFERKGHTTLILLSIILTLLPLCVCGVVFSDSTCVHLLSAALIGILWIQSGWIGHDSGHYNVMLNRRFNRVAQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSRFFNSLTSRFYDRKLIFDSLARFLVSYQHWTYYPVMCFARINLFAQSFFLLFSKRKVEHRGVELLGLLAFWVWYPLLVSFLPNWWERILFVVTSFSVTGIQHVQFCLNHFSSKVYLGPPSGDDWFEKQTNGTLDVSCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRKAALQARDGSGPVPKNLVWEAVNTHG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0368 447 PANTHER FATTY ACID DESATURASE 2 6 446 IPR012171 GO:0016491
Pvu1g0368 447 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 6 446 - -
Pvu1g0368 447 SMART Cyt_b5_2 8 80 IPR001199 -
Pvu1g0368 447 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 79 IPR001199 -
Pvu1g0368 447 CDD Delta6-FADS-like 140 402 - -
Pvu1g0368 447 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 80 IPR001199 -
Pvu1g0368 447 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 82 IPR036400 -
Pvu1g0368 447 Gene3D - 6 88 IPR036400 -
Pvu1g0368 447 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Pvu1g0368 447 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Pvu1g0368 447 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Pvu1g0368 447 PIRSF FA_sphingolip_des 3 434 IPR012171 GO:0016491
Pvu1g0368 447 Pfam Fatty acid desaturase 139 406 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0368 Pvu-Chr1 3469370 3472780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0368 7 447 Lipid Metabolism Gene Families AT2G46210 63.039 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0368 K21737 - gmx:100776476 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0368 1 3469370 3472780 Pvu1g0368 1 3469370 3472780 ECH