Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0361 ATGGAACGTGCTCGCAGGCTAGCGAACCGCGCCATTCTGAAGCGTCTGGTTTCAGAGGCAAAGCAGCACCAGAAGAATGAATCTGTACTGCACTCTTCCACCACCCCCATGTTGTTGTACTCTTCCTCTAGGTGCATGTCCTCTGTTTCCTCCCCTGCTCTGCGAAACAGAGGATCCAAAACAGATACCCTTCTGGGAAGGAGCATGAACATCGCCACCATGTCACGCGGCGTTGTTGGTGGCTTCCTTGGTGTTGGTTCAACCCGATCCATCTCGGTTGAAGCGCTTCAAGCGAGTGACACTTTCCCCAGGCGCCATAATTCTGCCACCCCAGAGGAACAGAGCAAGATGGCAGAGTCATGTGGCTTTGAGAGCATCGATTCTCTGGTTGATGCCACTGTGCCTAAGTCGATCCGCCTGAAGGAGATGAAGTTCGGGAAATTCGATGGAGGGTTGACAGAGAGCCAGATGATTGAGCACATGAAGGAGTTGGCCTCAAAGAACAAGGTTTTCAAGTCCTACATTGGGATGGGGTACTACAACACTCATGTTCCACCGGTGATCTTGAGGAACATAATGGAGAACCCTGCTTGGTACACTCAGTACACTCCTTACCAGGCTGAGATATCTCAGGGGAGGCTTGAGTCACTGCTGAATTACCAGACCATGATCACTGACCTCACTGGCTTGCCCATGTCCAATGCCTCATTGCTTGATGAGGGCACTGCTGCAGCTGAGGCAATGTCCATGTGCAATCACATCCAGAAAGGGAAGAAGAAGACCTTCATTATTGCAAGCAACTGCCACCCTCAGACCATTGATATTTGCAAGACAAGAGCTGCTGGATTTGATCTCAAGGTTGTGACAGCAGATCTTAAGGATATTGATTACAAATCTGGGGATGTGTGTGGTGTGCTTGTGCAGTACCCTGGGACTGAGGGTGAGGTGTTGGACTATGGGGAGTTCATCAAGAAGGCTCATGCTCATGAGGTGAAGGTTGTTATGGCAAGTGATCTGTTGGCTCTGACAGTGTTGAAGCCTCCTGGGGAGTTCGGGGCAGATATTGTTGTTGGGTCAGCTCAGAGGTTTGGAGTTCCAATGGGCTATGGAGGTCCTCATGCAGCTTTCTTGGCCACATCACAAGAGTACAAGAGGATGATGCCAGGAAGAATCATTGGGGTCAGTGTTGATTCTTCTGGAAAGACTGCTTTGAGGATGGCAATGCAAACTAGGGAGCAGCATATCAGGAGGGACAAGGCTACCAGCAACATTTGCACTGCCCAGGCACTTCTTGCAAACATGGCTGCTATGTATGCCGTGTATCATGGACCTGAAGGCCTTAAGAACATTGCACACCGTGTTCATGGTCTTGCTGGGGCCTTTGCTCTTGGATTAAAGAAACTTGGAACTGTGGAAGTTCAAGACCTTCCCTTCTTTGACACTGTGAAGGTTAAGACTTCCAACGCACATGCAATTGCTGATGCTGCTATCAGAAGTGAAATAAATTTGCGAGTTGTAGATGGAAACACTATCACTGTTGCTTTTGATGAAACAACCACATTAGAGGATGTTGATAAGCTTTTCAATGTCTTTGCTGGTGGAAAGCCAGTCTCCTTCACAGCTGCATCTCTTGCATCAGAAGTTCAAAGTGCAATTCCTTCTGGATTAACTAGGAATAGCCCTTATCTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGCTGCTTAGATACTTGTATAGGCTACAATCAAAAGATCTCTCACTATGTCACAGTATGATTCCATTGGGATCTTGTACAATGAAGCTGAATGCAACGACTGAAATGATGCCTGTGACATGGCCCAGCTTTAGTGATCTTCACCCTTTTGCACCAGTTGACCAGGCTGAAGGTTATCAGGAACTGTTCAACAATTTGGGTGACTTGTTGTGTACCATCACCGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGTGCTTCTGGAGAATATGCTGGACTTATGGTTATCCGTGCATATCATCTGGCAAGAGGTGACCATCACCGCAATGTTTGCATTATACCTGTCTCAGCACATGGTACAAATCCTGCTAGCGCTGCTATGTGTGGAATGAAAATTGTCTCAGTTGGAACTGATGCCAAGGGAAACATTAATATAGAAGAGTTGAGGCAGGCTGCTGAAAAACACAAGGACAACTTATCTGCACTTATGGTAACATATCCTTCCACCCACGGTGTTTATGAGGAAGGTATTGATGAGATTTGCAAGATTATTCATGATAATGGGGGCCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTGGGACTCACAAGCCCAGGTTGGATAGGAGCAGATGTTTGTCATCTCAATCTCCACAAGACATTCTGCATCCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCCCACCCTGTGATATCAACTGGTGGAATTCCTGCCCCTGACAAATCTGAACCACTTGGTACCATCTCTGCTGCACCATGGGGCTCAGCACTCATATTGCCAATCTCTTACACTTACATAGCCATGATGGGTTCTGGAGGACTCACTGATGCATCAAAGATAGCCATTTTGAATGCAAACTACATGGCCAAACGATTGGAGAACTATTACCCAGTTCTTTTCCGGGGAGTCAATGGAACAGTTGCTCATGAGTTCATTATTGACTTGAGAGGCTTTAAGAATACTGCTGGAATTGAGCCTGAAGATGTTGCAAAACGCCTCATGGACTATGGTTATCATGCACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCTACAGAGAGTGAAAGCAAGGCCGAGTTGGACAGGTTCTGTGATACTCTTATTTCAATTAGACAAGAAATTGCTGAGATAGAGAAAGGAAAGGTTGACATCAACAACAATGTCCTTAAGGGAGCTCCTCATCCACCATCACTTCTCATGGCTGATGCATGGACAAAACCATACTCAAGGGAATATGCAGCCTTCCCAGCTCCATGGCTCCGTGCTTCAAAGTTCTGGCCTACCACAGGACGTGTTGATAATGTGTATGGTGACCGCAACCTCATCTGCACCCTTCTCCCAGCATCACAGGCTGTAGAAGAAGAAGCTGCAGCCACAGCCTAG 3189 0.4719 MERARRLANRAILKRLVSEAKQHQKNESVLHSSTTPMLLYSSSRCMSSVSSPALRNRGSKTDTLLGRSMNIATMSRGVVGGFLGVGSTRSISVEALQASDTFPRRHNSATPEEQSKMAESCGFESIDSLVDATVPKSIRLKEMKFGKFDGGLTESQMIEHMKELASKNKVFKSYIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNHIQKGKKKTFIIASNCHPQTIDICKTRAAGFDLKVVTADLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHAHEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKNIAHRVHGLAGAFALGLKKLGTVEVQDLPFFDTVKVKTSNAHAIADAAIRSEINLRVVDGNTITVAFDETTTLEDVDKLFNVFAGGKPVSFTAASLASEVQSAIPSGLTRNSPYLTHPIFNTYQTEHELLRYLYRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFSDLHPFAPVDQAEGYQELFNNLGDLLCTITGFDSFSLQPNAGASGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIEELRQAAEKHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVISTGGIPAPDKSEPLGTISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGYHAPTMSWPVPGTLMIEPTESESKAELDRFCDTLISIRQEIAEIEKGKVDINNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAPWLRASKFWPTTGRVDNVYGDRNLICTLLPASQAVEEEAAATA* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0361 1062 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 96 1053 IPR003437 GO:0004375|GO:0006544
Pvu1g0361 1062 Pfam Glycine cleavage system P-protein 543 824 IPR020581 GO:0004375|GO:0006546
Pvu1g0361 1062 Pfam Glycine cleavage system P-protein 105 531 IPR020581 GO:0004375|GO:0006546
Pvu1g0361 1062 Coils Coil 721 741 - -
Pvu1g0361 1062 Gene3D Aspartate Aminotransferase, domain 1 861 1000 IPR015422 GO:0003824
Pvu1g0361 1062 Gene3D - 185 445 IPR015421 GO:0003824
Pvu1g0361 1062 Gene3D - 614 842 IPR015421 GO:0003824
Pvu1g0361 1062 TIGRFAM gcvP: glycine dehydrogenase 105 1046 IPR003437 GO:0004375|GO:0006544
Pvu1g0361 1062 CDD GDC-P 574 969 IPR020581 GO:0004375|GO:0006546
Pvu1g0361 1062 CDD GDC-P 154 531 IPR020581 GO:0004375|GO:0006546
Pvu1g0361 1062 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1062 - -
Pvu1g0361 1062 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1062 IPR020581 GO:0004375|GO:0006546
Pvu1g0361 1062 SUPERFAMILY PLP-dependent transferases 569 1047 IPR015424 -
Pvu1g0361 1062 Gene3D Aspartate Aminotransferase, domain 1 174 527 IPR015422 GO:0003824
Pvu1g0361 1062 SUPERFAMILY PLP-dependent transferases 105 532 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0361 Pvu-Chr1 3411245 3418347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0361 K00281 - gmx:100819714 2006.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0361 1 3411245 3418347 Pvu9g0795 9 12642008 12647779 PCT