Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0358 ATGAGGGAGGAAAAAGAAAACCCTTCAGAGAACAGGTCCAAAGCTTCAAAATTTTCTGATCAAAACCAACCCCCAAAGCCTCAAAACACCAAGGGAACCAACCCCAACAACAACAGCTCCAAAACCAGGTTGTGGGGTGCTCACATTGTGAAGGGCTTCTCTGCTGACAAAAAAGCAAAGCCCTTTGCCAATAAAAAACAAACGCTAACTTCTTCAACAACAACCTCGGAGAGTGTTGTTGTTGCTAACCAGAAGAACAACAGCAGCAACCCTTTTGTACCTTCTCATTCCAGAGTGAAGAGGTCTCTCATAGGTGACTTGTCATGTTCAATCAACCCTGCTCAGGTTCATCCGCATGCATTCCCAACTCATAGGAGACAATCTTCCACTGATTTGTTCACTGAGTTGGATCACATGAGGGGGTTGTTGCAAGAGTCTAAGGAGAGGGAGTGCAAGCTGAATGCTGAGCTGGCAGAGTGTAGGAAGAGGGTGAGTGAGGTGGATGAGGTTGTGAAGAGGGTTGGGTTGTTGGAACAAGACAAGGCCACTCTCACTGAGCAATTGGCTGCACTGACTTGCGAGGAAGTGAAAGGGGAAGTAGAGCAGCACAAGGAAGTGAAGGTGCAGAATCTTGAGCTGGAAGTTGTGGAGTTGAGGAGGCTGAATAAGGAGCTGCAGATGCAGAAGCGGAACCTCACTTGCAGGCTTTCTTCTCTTGAGGCTCAGTCTGCATGTCCTAACAAATCTTCCGAGAGTGATGTTGTTGCCAAAATTAAAGCCGAGGCATCATTGCTGAGGGTCACGAATGAAGACCTGTGCAAACAAGTGGAAGGTTTGCAGATAAGCAGATTGAATGAGGTTGAAGAGCTTGCCTACTTGAGGTGGGTGAATTCTTGTTTAAGAAATGAGTTGAAGAACACATGCTCAGCACTGGATTCTGATAAGCCATCTAGCCCTCACACAGTTGTGAGCAGTAGTGGAGATTGTGTAAGTTCTTTCTCTGATCAAGCCAATAGGTACTTAAACTGTGGCAGTGTAAATAGGTTCAACATGATGAAGAAGCCAAAAAAGTGGCCCATAACATCACAAGTAGAGTGCCAAGGCAGTCTCATTGAGAAAAATTGGATTGAATCAGATGTTGCAGGGGGAAGCCCCAGAAGAAGACACTCTATCAGTGGATCAAACTACTCAGAGGAAGATGTTGTTTTGAGTAAGAGAAGACAGTCTGATTGTTTTGTATGTTCAAAGGAAATGGAAAAGGAATCAGTGTCATTGTCTGTTCAACAACCTGGTTTGGAGATTGTCCAAAGACCACAATATTTTGGCAATTGCCAAGAAGCTAACAAGCTTTTGGTTTCTTCAGATGTTGAGAAGAGGGCCCTACGCATTCCTAATCCTCCTCCAAGGCCTTCATGTTCTATTTCCAGCAAAATAAAACAAGAAAGTTCAGCTCAAGTTCTACCTCCCCCACCTCCACCTCCTCCCCCACCTCCTATGAATTTTGCATCAAGAAGTAACACGGCAACGGTGAAACGTGCCCCACAAGTGGTGGAATTGTACCACTCACTTATGAAGAGAGACTCTAGAAAGGATTCTTCAAATGGAGGACTCTCTGATGCACCGGATGTTGCTGATGTTCGTAGCAGCATGATTGGAGAAATTGAAAACCGTTCTTCACACTTGCTTGCTATAAAGGCAGATATCGAGACTCAGGGAGAATTTGTGAATTCATTGATTAGAGAGGTGAAGAATGCAGTTTATCAGAACATAGAAGATGTAGTGGCATTTGTGAAGTGGCTAGATGATGAACTGTGTTTCCTTGTGGATGAGAGGGCAGTCCTTAAGCATTTTGATTGGCCAGAGAAGAAAGCCGACACATTAAGAGAAGCAGCATTTGGGTATCAGGATTTGAAGAAATTAGAATCTGAAGTTTACTCCTACAAGGATGATCCTCGTCTACCTTGTGATATTGCCCTAAAGAAAATGGTTGCATTGTCTGAAAAGATGGAGCGTACAGTTCATAACCTTCTTCGCACCAGAGAGTCACTAATGCGTCACTGCAAGGACTTTCAAATTCCCATAGAATGGATGCTGGACAATGGAACTATTGGCAAGATAAAGCTAAGCTCAGTTAAATTGGCTAAAAAGTATATGAAAAGGGTAGCTATGGAACTCCAAGTAAAGTCAGCATTAGAAAAAGACCCTGCAATGGATTACATGCTTCTCCAAGGAGTGAGATTTGCTTTTAGAATCCATCAGTTTGCTGGAGGATTTGATGCAGAAACAATGCATGCATTTGAGGAGCTTCGCAATCTGGCTTCTCTTCTCAACAAAACATAA 2340 0.4376 MREEKENPSENRSKASKFSDQNQPPKPQNTKGTNPNNNSSKTRLWGAHIVKGFSADKKAKPFANKKQTLTSSTTTSESVVVANQKNNSSNPFVPSHSRVKRSLIGDLSCSINPAQVHPHAFPTHRRQSSTDLFTELDHMRGLLQESKERECKLNAELAECRKRVSEVDEVVKRVGLLEQDKATLTEQLAALTCEEVKGEVEQHKEVKVQNLELEVVELRRLNKELQMQKRNLTCRLSSLEAQSACPNKSSESDVVAKIKAEASLLRVTNEDLCKQVEGLQISRLNEVEELAYLRWVNSCLRNELKNTCSALDSDKPSSPHTVVSSSGDCVSSFSDQANRYLNCGSVNRFNMMKKPKKWPITSQVECQGSLIEKNWIESDVAGGSPRRRHSISGSNYSEEDVVLSKRRQSDCFVCSKEMEKESVSLSVQQPGLEIVQRPQYFGNCQEANKLLVSSDVEKRALRIPNPPPRPSCSISSKIKQESSAQVLPPPPPPPPPPPMNFASRSNTATVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREAAFGYQDLKKLESEVYSYKDDPRLPCDIALKKMVALSEKMERTVHNLLRTRESLMRHCKDFQIPIEWMLDNGTIGKIKLSSVKLAKKYMKRVAMELQVKSALEKDPAMDYMLLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0358 779 Coils Coil 174 194 - -
Pvu1g0358 779 MobiDBLite consensus disorder prediction 1 42 - -
Pvu1g0358 779 MobiDBLite consensus disorder prediction 14 42 - -
Pvu1g0358 779 MobiDBLite consensus disorder prediction 461 504 - -
Pvu1g0358 779 Coils Coil 201 242 - -
Pvu1g0358 779 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 1 779 - -
Pvu1g0358 779 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 779 IPR040265 -
Pvu1g0358 779 MobiDBLite consensus disorder prediction 485 501 - -
Pvu1g0358 779 SUPERFAMILY Formin homology 2 domain (FH2 domain) 488 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0358 Pvu-Chr1 3395091 3399530 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0358 - - gmx:100778600 1333.55