Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0351 ATGCAATGGGTAAGAAAAGTGTATTTCTGGATAATTCGAGTTATCTCACATTCCATTTTCGGTGCATGCATGAAATTGGTCAACCGAGTGTCCGAGTTTAGCAAGAACATCTCCGATTCTTCACCACCGCCATTGTTATCGCTGTCGATGTCGTCTTCTTCCGTGAACGACACCGAGGCTCTCCGGCGCAATCGCATCCTCTCCAGCAAGCTCTACTTCGACGTGTCTCCGTCCAAGGTTCCGCTAATCTACTCCGAGTCCTACGACATAGCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGCCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAAAATGCATCGTTGAGCCTCTGGAAGCTTCCAAGGATGATCTTCTAGTGGTTCACACTGAATTGTATCTGAATAGGCTGAAGGAGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCCGTGGCATTAATTCCCAATTGTCTTGTGCAACAAAAACTTCTTTCCCCGTTCAGGAAGCAGGTTGGAGGAACTGTACTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTTGGAGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTCTGTGCTTATGCAGATATTTCTCTTTGCATCCACTTTGCTTTTGTTCGGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCTATGATAGCCGAGTCTATATCTTGGATATGTACAATCCTGGAATATATCCTTTGGATTACGAGGCTAGAAACTACATAAATCAGAAAGTTGAAGTAAAGAGTGGGACGGTTACAGAAGAGTACCTGCAAAAATTAGATGAAGCACTAGAGGTTGCTGGGCGTAGGTTTAACCCTGAGTTGGTAATTTATAATGCTGGAACCGACATCCTAGAAGGAGATCCATTAGGAAGGTTGGAGATCAGTCCTGAAGGAATTGCCCTTAGAGATGAAAAAGTTTTCCGGTTTGCTCGTGAGAGAAACATTCCCATCGTCATGCTCACTTCAGGTGGTTACATGAAATCTAGTGCCAGAGTGATTGCAGATTCAATAGTCAATCTTTCCAAGAAATGCTTGATAGAAACCAGTGGAGCTCCAAAGTCTTCGTGA 1194 0.4422 MQWVRKVYFWIIRVISHSIFGACMKLVNRVSEFSKNISDSSPPPLLSLSMSSSSVNDTEALRRNRILSSKLYFDVSPSKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICRFLVSFGILDKKCIVEPLEASKDDLLVVHTELYLNRLKESSKVAMIVEVPPVALIPNCLVQQKLLSPFRKQVGGTVLAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVRLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTVTEEYLQKLDEALEVAGRRFNPELVIYNAGTDILEGDPLGRLEISPEGIALRDEKVFRFARERNIPIVMLTSGGYMKSSARVIADSIVNLSKKCLIETSGAPKSS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0351 397 Gene3D Histone deacetylase domain 79 393 IPR037138 -
Pvu1g0351 397 SUPERFAMILY Arginase/deacetylase 77 382 IPR023696 -
Pvu1g0351 397 PRINTS Histone deacetylase superfamily signature 203 226 IPR000286 -
Pvu1g0351 397 PRINTS Histone deacetylase superfamily signature 237 252 IPR000286 -
Pvu1g0351 397 PRINTS Histone deacetylase superfamily signature 314 324 IPR000286 -
Pvu1g0351 397 CDD HDAC_classIV 99 382 IPR044150 GO:0004407|GO:0016575
Pvu1g0351 397 PANTHER HISTONE DEACETYLASE 11 50 392 - -
Pvu1g0351 397 PANTHER HISTONE DEACETYLASE 11 50 392 - -
Pvu1g0351 397 Pfam Histone deacetylase domain 99 380 IPR023801 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0351 K11418 - gmx:100781276 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0351 1 3347504 3353693 Pvu1g0351 1 3347504 3353693 ECH