Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0347 ATGGCCGATTCAACCTCAAGCGATTCTCTCTCGCTAGACATCGATTCCTTCTCTCCTTCACCTCAGGAGCATATCATCAGAACACGTCATGGTTCTGTATCCGTTTCTGTATACGGAGACCAGGATAAGCCAGCACTTATCACATATCCAGATTTGGCTTTAAATTATGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCCGAGGCATATTACCTTCTGCTCCACAATTTCTGCATTTATCACATTAGTCCACCTGGGCATGAGTTAGGAGCTGTTCCAATTGATCCAGATTACCCAATTCCCTCTGTAGATGACTTAGCTGATCAAATAGCTGAGGTTCTCAACTTTTTCGGTCTTAGTGCAGTCATGTGTATGGGAGTAACTGCTGGGGCTTACGTTTTAACCTTATTTGCTATGAAGTATAGACAACGTGTTCTTGGTTTGATACTTGTTTCACCTCTGTGTAAAGAACCATCTTGGGCTGAATGGTTATACAACAAGGTCATGTCAAATTTACTATACTTCTATGGCATGTGTGGCGTAGTAAAGGAAATATTGCTGAAACGGTACTTTAGCAAGGAAATTCGAGGTGGTACACAATTGCCGGAGTCGGATACAGTTAAAGCTTGCCGAAGGTTGTTGGATGAGAGGCAGAGCTTGAATGTGTGGCGATTCCTGGAAGCAATTAACGGGAGACCTGACATAAGTGAAGGGTTGAGAAAATTACAGTGCCGCTCACTTATTTTTGTTGGGGATATGTCACCATTTCACTCGGAGGCCCTCCACATGACTTCAAAATTGGACAGACGATTCAGTGCCTTAGTTGAGGTTCAAGCATGTGGATCAATGGTAACAGAGGAGCAGCCTCATGCCATGTTAATACCAATGGAGTACTTTCTCATGGGATATGGCTTGTACAAGCCATCCAAGCTGAGTGTCAGCCCAAGAAGCCCCCTGAGTCCATCTTGCATATCTCCGGAGCTTTACTCGCCGGAGAGTATGGGTTTGAAGTTGAAACCCATAAAGACACGAATTTCTCTGGAAATCTAG 1050 0.44 MADSTSSDSLSLDIDSFSPSPQEHIIRTRHGSVSVSVYGDQDKPALITYPDLALNYVSCFQGLLFCPEAYYLLLHNFCIYHISPPGHELGAVPIDPDYPIPSVDDLADQIAEVLNFFGLSAVMCMGVTAGAYVLTLFAMKYRQRVLGLILVSPLCKEPSWAEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEIRGGTQLPESDTVKACRRLLDERQSLNVWRFLEAINGRPDISEGLRKLQCRSLIFVGDMSPFHSEALHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISLEI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0347 349 SUPERFAMILY alpha/beta-Hydrolases 22 299 IPR029058 -
Pvu1g0347 349 Gene3D alpha/beta hydrolase 18 302 IPR029058 -
Pvu1g0347 349 Pfam Ndr family 23 306 IPR004142 -
Pvu1g0347 349 PANTHER N-MYC DOWNSTREAM REGULATED 5 349 IPR004142 -
Pvu1g0347 349 PANTHER PROTEIN NDL2 5 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0347 Pvu-Chr1 3306542 3311275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0347 - - gmx:100815084 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0347 1 3306542 3311275 Pvu1g0347 1 3306542 3311275 ECH
Pvu9g0791 9 12613160 12618036 Pvu1g0347 1 3306542 3311275 ECH
Pvu1g0347 1 3306542 3311275 Pvu9g0791 9 12613160 12618036 PCT