Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0343 ATGTCGGGGGCTGAAAGAGAAAAAGTCATACATGGTATTGGAGTTTCTGCATTAAGTGATATCATCAGTGAGGTGGATACTATACAGTCTTGTGGAGGCCAGAAGACTGTTGATGGTAGCCGATTTCGGACAAGGGGTGGTGTATTGTGGAGCATCATTAAGGTTCGAGAACCAAATGCTTACAAAGAGATCATGAAAAAAGCAAAGGAGTTTGAGGACCCTTCTGTTTTCAGTGTTAAAACACTTTACATATTTGTGTTCCTTGTATTGAATAAAACAGTGAAGTTTGTTTTGGTTTTGGATGTATATGTACCTATTATCTGGGATAGCAAGAAGCAGCCCCCATTCAGTCAGCCAAATGTTAAGCAGCCACCACTGCAAAAGAAAGAGGATTCTTCTCAAGAGGAGTCCTCTACATTTGGTTGCAGATTAAGGATACCAATCTCTTATGATGATGACTTGCTCGAATTAAGCATGCATAACAATCCAACCTTCATTCCATTGTCATTTTAA 513 0.3957 MSGAEREKVIHGIGVSALSDIISEVDTIQSCGGQKTVDGSRFRTRGGVLWSIIKVREPNAYKEIMKKAKEFEDPSVFSVKTLYIFVFLVLNKTVKFVLVLDVYVPIIWDSKKQPPFSQPNVKQPPLQKKEDSSQEESSTFGCRLRIPISYDDDLLELSMHNNPTFIPLSF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0343 170 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 7 70 IPR019385 -
Pvu1g0343 170 Gene3D - 5 75 IPR038092 -
Pvu1g0343 170 MobiDBLite consensus disorder prediction 115 140 - -
Pvu1g0343 170 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 8 73 IPR039047 GO:0006408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0343 Pvu-Chr1 3256677 3257875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0343 K14291 - pvu:PHAVU_001G033700g 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0343 1 3256677 3257875 Pvu9g0783 9 12538200 12545152 PCT