Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0341 ATGGCCAATGAACAAAACACTTCAAGAACATCCCAGAGAAGTGATCCAGGCTGGAAACATTGTCATCCATTGGATGACACAAATTTAAATACAATTGTTTGTAACTACTGTGGAAAAATTATGAAAGGCGGAGTTACTAGGACCAAAGAACATTTGATGGCGAAGAAAGGCAATGTTGTTGCTTGCACCAAGACTCCTAAAAATGTAAGAGAAGAGCTTTGGAATTTATTGAAAGAAAAAACAACCACTTGTTCCGTTAATCACGTATATGGTGCGACGACATGTGATAATATTGAAAGTGAAGATGAAGTTGAAATTTCCACCGCCAGTAATGATAGGGAGAGAAATAGTGGTGGAAAAAAAGGACCAATGGATGCCTTTATTAGAAATCCAAATGTTGTAATAGAGAAGAGAAAGAGAGAACAACTCACGCAGACTAATATTAAAGAAGCATGTGACAAGAACTTAAAGGCATCCGTTCATCAATATATTGCTCGATTTTGGTATCAAGCGGGTTTGTCATTCAATCTTGTAAGATTGAAGAGCTTTCAAGATATGATTGATGCTATAGGTGCTTATGGACCTAATTTGCCAACTCCTAGCTATCATGAGATTAGAGTTCCACTCCTCAACAAGGAAGTTGAGTACACCGAAAAGTTGTTGAAAGATCATAAATTGCAAGGGAGCAGGCATGGTTGTTTTATCATGTCAGATGCATGGACTGATCGAAAGCAATGGTGTTTGATTAACTTTTTGGTGAGCTCTCCTGCAGGGACAATGTTTGTCAAGTCGATTGATGGTTCTAAATTTGTGAAGACAGGAGAAAAGCTCTTTGAGATGCTTGATGCTCTTGTGGAGGATATTGGAGAAGAAAATGTCGTTCAAGTTATCACAGATAATGGTAGTAATTATGTCTTTGTTGGTAGATTACTGGAAGCAAAAAGACCTAATCTTTATTGGACTCCTTGTGCTGCCCATTGTATAGATTTGATGCTTGAAGACATCGGAAAGATTCCTTTGATAAAGAAGACGATTCAGAGAGGAGTTAATCTTGTTGGCTTCATCTATAGCCATTCTAGTACCTTGAGTTTATTGAAACAATTTACAAATAAGAGGGAATTGGTAAGACATGCAGTTACAAGGTTTGCTACCTCTTATTTAACACTACAAAGGTTGTATCAAGAGAAGGGAAATTTGAGAAAAATGTTTGCTTCAGATGATTGGAGCAAAAACAAGTTGTATAAGGAAGCTAAGGGGAAAGAAGCTACCAAAATTGTTCTTATGCCTTCATGTTGGAATCATGTTGTATTTACTCTCAAAGTCATGGCTCCTCTAGTTCATGTACTTCGTTTGGTTGATGGAGAGAGAAAAGCAGCAATGGGTTATATATATGAAACAATGGAGAAAGCAAAAGAAACAATAATGAAGTCATTCAATAACAATGAAAGTAAGTACAAAGATGTATTTACAATAATTGATAATAGATGGACATGTCAGCTTCATCGCCCCTTGCATACAGCCGGTCACTTTTTGAATCCAGAGTTTTATTATTCTAATCCAGAAATGGAATATGATTTGGAAGTTACAAATGGATTGTATGCTTGCATCAAGAGGTTGGTGCCAAGTAAAGATGTGCAACAAAAAAATTTAACCGAGTTGCCTCTTTATAAGAGTGGAAGTGGACTGTTTGGTGATGACTTTGCCAAAGAATCAAGGAAGACCACAACCCCAGATGAGACA 1740 0.3701 MANEQNTSRTSQRSDPGWKHCHPLDDTNLNTIVCNYCGKIMKGGVTRTKEHLMAKKGNVVACTKTPKNVREELWNLLKEKTTTCSVNHVYGATTCDNIESEDEVEISTASNDRERNSGGKKGPMDAFIRNPNVVIEKRKREQLTQTNIKEACDKNLKASVHQYIARFWYQAGLSFNLVRLKSFQDMIDAIGAYGPNLPTPSYHEIRVPLLNKEVEYTEKLLKDHKLQGSRHGCFIMSDAWTDRKQWCLINFLVSSPAGTMFVKSIDGSKFVKTGEKLFEMLDALVEDIGEENVVQVITDNGSNYVFVGRLLEAKRPNLYWTPCAAHCIDLMLEDIGKIPLIKKTIQRGVNLVGFIYSHSSTLSLLKQFTNKRELVRHAVTRFATSYLTLQRLYQEKGNLRKMFASDDWSKNKLYKEAKGKEATKIVLMPSCWNHVVFTLKVMAPLVHVLRLVDGERKAAMGYIYETMEKAKETIMKSFNNNESKYKDVFTIIDNRWTCQLHRPLHTAGHFLNPEFYYSNPEMEYDLEVTNGLYACIKRLVPSKDVQQKNLTELPLYKSGSGLFGDDFAKESRKTTTPDET 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0341 580 Pfam Protein of unknown function (DUF 659) 200 347 IPR007021 -
Pvu1g0341 580 MobiDBLite consensus disorder prediction 566 580 - -
Pvu1g0341 580 SUPERFAMILY Ribonuclease H-like 230 558 IPR012337 -
Pvu1g0341 580 MobiDBLite consensus disorder prediction 560 580 - -
Pvu1g0341 580 MobiDBLite consensus disorder prediction 1 21 - -
Pvu1g0341 580 ProSiteProfiles Zinc finger BED-type profile. 12 69 IPR003656 GO:0003677
Pvu1g0341 580 MobiDBLite consensus disorder prediction 101 123 - -
Pvu1g0341 580 MobiDBLite consensus disorder prediction 106 120 - -
Pvu1g0341 580 Pfam BED zinc finger 17 52 IPR003656 GO:0003677
Pvu1g0341 580 PANTHER HAT TRANSPOSON SUPERFAMILY PROTEIN 28 558 - -
Pvu1g0341 580 PANTHER OSJNBA0013A04.12 PROTEIN 28 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0341 Pvu-Chr1 3243584 3245323 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0341 - - pvu:PHAVU_004G060200g 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0341 1 3243584 3245323 Pvu1g0341 1 3243584 3245323 ECH