Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0220 ATGTCACAGTTTGTGTATGAAAGCAGAAGGCCTGTGAGAATAATCCCAAGTACACCAGGGAAGACAATAGTGGTGTCAGGTATACAAGAGAAGACCATTTCTGAGAGTTTCACTTTGCAGAAAATAATGGTAGCATTGAAAAATGCAGACAGAGACAAAAATGACAGTTTCAACAAGGATGAACTGAAGCAAGCCCTCAAAGACTTGGGTGCCTTCTTCCCTGGTTGGAGATCCTTTCGAGCTTTTGCAAAAGCTGATGCCAACAACGACGGTCAGATTAGCGGCCACGAAATCGACACTCTCCTTGAGTATCTTTATTCTTGTGGCTTTGGAAAATAA 339 0.4248 MSQFVYESRRPVRIIPSTPGKTIVVSGIQEKTISESFTLQKIMVALKNADRDKNDSFNKDELKQALKDLGAFFPGWRSFRAFAKADANNDGQISGHEIDTLLEYLYSCGFGK* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0220 112 ProSiteProfiles EF-hand calcium-binding domain profile. 37 72 IPR002048 GO:0005509
Pvu1g0220 112 SUPERFAMILY EF-hand 36 98 IPR011992 -
Pvu1g0220 112 Gene3D - 23 107 - -
Pvu1g0220 112 SMART efh_1 41 69 IPR002048 GO:0005509
Pvu1g0220 112 SMART efh_1 77 105 IPR002048 GO:0005509
Pvu1g0220 112 ProSiteProfiles EF-hand calcium-binding domain profile. 80 108 IPR002048 GO:0005509
Pvu1g0220 112 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0220 Pvu-Chr1 1832226 1832564 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0220 - K02183 vra:106764438 193.356