Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0182 ATGGCCAAATCGAGCGCCGACGATGGCGAGCTCCGGCGAGCTTGCGACGCCGCAATTGAGGATCCGAAGCAGAAGATCGTGATGGCGCTTCGCGTCGCCAAGAGTCACGGCATCTTGGGAAAATCGTCCAAGCTCGGTCGCCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTCCATTGTTGGTGATGACGTGGTATTTGCTGCAGCGAAATCGAAGGGTCAGAGGACATCGGCTTTTCTTCGCGTATTGAAGTATTCTACGGGAGGGGTTCTTGAACCTGCAAAGCTATACAAGCTAAAGCACCTGTCAAAAGTGGAAGTTGTAGCAAATGATCCCAGTGGATGTACATTTACTCTGGGATTTGATAACCTTAGAAGCCAGAGTGTCGCTCCTCCTCAATGGTCCATGCGCAATATTGATGACAGGAATCGCCTCCTTCTTTGCATCTTGAACATATGCAAAGATGTTTTGGGTCGCCTTCCAAAGGTTGTCGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCCCTGTTTCTGCTCAGAATAAAGTGCGAGATGGTGGTCCTGTTGCATCTGTTGTGAGGGAGACAGAATTGAAAGTTAACGTTGAAAAGGAACTTGTTTCCCAGGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAACCTATGTCATGGGTATTGGTGAAGCAGAAGAATTTTCTGAAAGGTTGAAGAGGGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATTCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTTATGCAAGGGCTTGAAGCTGCAACCAGTGTTGTGGAAGATATGGATGAATGGTTAAGCATATTCAATTTAAAACTCCGGCACATGAGGGAGGATATTGCATCGATAGAAACCCGCAATAACAATCTAGAAATGCAGTCAGTTAATAACAAATCTCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGGTTGCGTGTCCCTTCTGAGTATGCTGCAAGTTTGACAGGAGGTTCATTTGATGAAGCTCGAATGCTTCAAAATGTTGAAGCATGTGAGTGGTTGACTAGTGCCTTACGTGGCCTTGAAGCACCTAATCTAGACCCTAGTTATGCAAATATGAGAGCTGTTAAAGAAAAGCGTGCAGACCTTGAAAAGTTAAAATCTACTTTTGTCAGGAGAGCATCCGAATTCTTGAGAAATTATTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAAGCTACTTTTCTCAGCGAGGACAGTTAAAGAGGCCTGATCATGCTGACTTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGATAAGAATTGCTTGGGTCCACTGAGAAAAGCGTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGTGAGTTTGCCAATGAGCTTCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTCGAAGGTTCTGCAGGTTCTGGTCAGAATGTAAACGCTACTGACACTTCCACAGTCTCCGATGCTTATGCAAAGATGCTTACGATTTTTATCCCACTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTTATGTGCTTTGAAGTTCCTACACTTGTTCCTCCTGGAGGTGTTGTTAATGGAAACAAAACTGGGTATGATGATGATGATGATGATTTGGGAATTCTGGATATTGATGAGAATGACAGCAAATCTGGTAAAACTTCTGCCGAGCTTGAAGCTTTGAATAAATCACTTAAGGATTTACTTGATGGAATACAAGAAGACTTTTATGCTGTTGTGGACTGGGCGTACAAGATTGATCCTCTACGCTGTATATCAATGCATGGAATAACAGAGCGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTGATTTACTTCGTGACCTGGAGTCTCGGATATCTATGCAGTTCAACCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAACGGAATGTTCGCCAAATGGGTGTTCTCTCCTACATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCATAATGTTTGCAACTTTAGAAAAAATTGCACAAACAGAACCGAAGCATGCAGATATTTTTCTTTTTGAGAACTATGCTGCCTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCCACTTTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAGCAAGCTTGTACACGTCATATTAGCATGATAATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAGGACTTGATGTTCACTGTTCCACCTGAAGAGATTCCTTTTCAACTTGGACTGTCAAAACTGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTTGACAAGTCCATTGCTACGATGTATAAGAAACTGCAAAAGAACTTGACTTCAGAGGAACTATTACCCTCTTTATGGGACAAATGCAAGAAGGAGTTTCTTGATAAGTACGAAGGTTTTGCCCAACTTGTGGCTAAGATTTACCCTACGGAGTCAATCCCATCAGTTGCAGAGATGAGAGACCTTTTAGCTTCCATGTAG 2685 0.4346 MAKSSADDGELRRACDAAIEDPKQKIVMALRVAKSHGILGKSSKLGRQMAKPRVLALSIVGDDVVFAAAKSKGQRTSAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVANDPSGCTFTLGFDNLRSQSVAPPQWSMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPPVSAQNKVRDGGPVASVVRETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHSLLESEPLMDEVMQGLEAATSVVEDMDEWLSIFNLKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYAASLTGGSFDEARMLQNVEACEWLTSALRGLEAPNLDPSYANMRAVKEKRADLEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSAGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKTGYDDDDDDLGILDIDENDSKSGKTSAELEALNKSLKDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRDLLRDLESRISMQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTEPKHADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVPPEEIPFQLGLSKLDLRKMLKSSLSGVDKSIATMYKKLQKNLTSEELLPSLWDKCKKEFLDKYEGFAQLVAKIYPTESIPSVAEMRDLLASM* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0182 894 Coils Coil 198 218 - -
Pvu1g0182 894 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 65 154 IPR028258 -
Pvu1g0182 894 PANTHER SEC3/SYNTAXIN-RELATED 1 894 - -
Pvu1g0182 894 Coils Coil 231 258 - -
Pvu1g0182 894 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 894 - -
Pvu1g0182 894 Coils Coil 291 328 - -
Pvu1g0182 894 Pfam Exocyst complex component Sec3 589 877 IPR019160 GO:0000145|GO:0006887
Pvu1g0182 894 Pfam Exocyst complex component Sec3 234 493 IPR019160 GO:0000145|GO:0006887
Pvu1g0182 894 Coils Coil 585 605 - -
Pvu1g0182 894 SMART Sec3_PIP2_bind_2 48 156 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0182 Pvu-Chr1 1483323 1499693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0182 1 894 EF-hand Containing Proteins AT1G47550 84.538 0.0 1568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0182 K19983 - gmx:100779844 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0182 1 1483323 1499693 Pvu1g0182 1 1483323 1499693 ECH
Pvu1g0182 1 1483323 1499693 Pvu9g0573 9 10257457 10277148 PCT