Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2001 ATGAAGAAGGGAGAAAAGTCTGAAAGTTCTGGCATCAATTCCACGACGGATCTATCTTTGGGAGTGGTCATAGTTTCATTCATTCACTTGTTGGAACATTCGAGATTCATTACTATTCAGCTTCTTCATCCATTTCTGACAGCCTCGTATATGCTGTGTCCCTCTGTGGGGAGTGTTGTTGCTGATGTAGAACCAATGGATGTTGTCTGTGCAGAGTTTGAAGCAGCTGATGACAGGGGGAGCTCTCCTTGTTGGGATGAACCTGCCTGCAAGTCTACATATTTGGTTTCTGTTGTCATTGGTTTGTTTGATGATGTCGAAGATCATACATCTGATGGTGTCCAAGTCCGAGTGTGCTGTCAAGTTGATAAGGCAAACCAGGGGGAATTTGCACTTGATGTGGCTGTGAAAACTATCTATTATTATGCTCCACCATGTAGATGA 444 0.4347 MKKGEKSESSGINSTTDLSLGVVIVSFIHLLEHSRFITIQLLHPFLTASYMLCPSVGSVVADVEPMDVVCAEFEAADDRGSSPCWDEPACKSTYLVSVVIGLFDDVEDHTSDGVQVRVCCQVDKANQGEFALDVAVKTIYYYAPPCR* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2001 147 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 68 99 IPR042097 -
Pvu11g2001 147 Gene3D - 104 144 - -
Pvu11g2001 147 PANTHER AMINOPEPTIDASE 92 142 - -
Pvu11g2001 147 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 92 142 - -
Pvu11g2001 147 Pfam Peptidase M1 N-terminal domain 67 99 IPR045357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2001 Pvu-Chr11 46888055 46889428 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2001 K08776 - pvu:PHAVU_011G192300g 301.597