Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1915 ATGTCACTTTCTGGAAAAATCAGCACTGAAATTCCAGTTCAAGGAGCTCCGGAGAAATGGTTCCACACCTACACAAACCAACTGCACCATATTCAAAACGTGACTCATAAAGTTCATGCAGCCAAACTCCATGAAGGTGACGATTGGCACGCCAATGATTCGGTCAAACACTGGACTTATATCATCGACGGCAAGACAGTAACATGCCATGAAACTATTGAATCCGTTGATGAGCAGAACAAGAGAATTGTGTTCAAGCTCTATGGTGGAGATATCGATGATAAATATAAGGTGTTTATCCTAATCTTTGAAGCCATTGAGAAGGATGGTGGCAGTGCTGCAGTTAAATGGAGTGTTGAATATGAGAGGGTGAGTGAGGAAGTTCATGCTCCATATGGCTACTTGGAATTCTTTGACCATGTCATCAGAGATGTTGATGCTCATCTTCTCGAGACTCAAGAAAATGCCAACAAATAA 477 0.4172 MSLSGKISTEIPVQGAPEKWFHTYTNQLHHIQNVTHKVHAAKLHEGDDWHANDSVKHWTYIIDGKTVTCHETIESVDEQNKRIVFKLYGGDIDDKYKVFILIFEAIEKDGGSAAVKWSVEYERVSEEVHAPYGYLEFFDHVIRDVDAHLLETQENANK* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1915 158 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 150 - -
Pvu11g1915 158 SUPERFAMILY Bet v1-like 1 151 - -
Pvu11g1915 158 Gene3D - 1 151 IPR023393 -
Pvu11g1915 158 PANTHER MLP-LIKE PROTEIN 423 1 150 - -
Pvu11g1915 158 Pfam Pathogenesis-related protein Bet v 1 family 2 151 IPR000916 GO:0006952
Pvu11g1915 158 SMART Bet_v_1_2 2 152 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1915 Pvu-Chr11 46114345 46115789 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1915 - - pvu:PHAVU_011G183900g 255.758