Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1855 ATGGAAATGCAGTGGTCAATTGTAGATGATAGTTGTATCATTGATTTGATGGATTTGGGTCACCGCAACACCGCCAACAATGACATAAACACTGAATTTTTAAGATCAACTGAAGATGGTGGTGTTTATATCTTTGATTCCATGAACTTGGGTCAGAGCAACAACATGCACAACAATGGAAAAGAATCTTATTGCATCTGTCTTGGTGATTTTTCAATTGGTTCAAGAGCAATTCGCATGCCCCAACCATGTTCTCATATCTTTCATCAACATTGCATCACAGAGTGGCTCAACATCAGTCACACATGA 309 0.3883 MEMQWSIVDDSCIIDLMDLGHRNTANNDINTEFLRSTEDGGVYIFDSMNLGQSNNMHNNGKESYCICLGDFSIGSRAIRMPQPCSHIFHQHCITEWLNISHT* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1855 102 Pfam Ring finger domain 65 101 IPR001841 -
Pvu11g1855 102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 102 IPR013083 -
Pvu11g1855 102 SUPERFAMILY RING/U-box 65 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1855 Pvu-Chr11 45362966 45363384 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1855 - - pvu:PHAVU_011G178500g 222.631