Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1734 ATGGAAATTAACATGGCTTCCCTCAAACAACTTTCACCCCTGTTGCTCCCTCTGTTGCTCATTTCCCTCTTCAAACCCTCCAACGCCGCAGGAATCGCCGTCTACTGGGGTCAAAACGGCAACGAGGGCACCTTGGCCGACGCATGCAACACCGACAACTACCAATTCGTCAACATAGCATTCTTGTCCACGTTCGGCGGCGGCCAGACCCCGCAACTGAACCTCGCTGGCCACTGCGACCCCTCCACCAACGGTTGCACCCAGTTCAGCGACCAGATCAAGGCGTGCCAGAGCAAAGGCATCAAAGTGCTGCTCTCACTAGGCGGCGCCAGCGGCAGCTACTCCCTCAGCTCCGCCGACGACGCAACACAAGTTGCCAACTTCATCTGGAACAACTTCCTCGGCGGGCAGTCGAGCTCCCGTCCGCTGGGCGACGCCGTCCTGGACGGTGTCGATTTCGACATCGAAGCCGGCAGCGGCGAACACTGGGACGAGCTGGCGAGAGTCCTGAAGGGATTTAGCTCCGTGCTCTTAGCCGCTGCACCGCAATGTCCGATTCCCGATGCTCACTTGGATTCCGCCATCAAAACCGGACTCTTTGACTATGTGTGGGTGCAATTCTACAACAACCCTTCTTGTCAGTATTCCAGTGGCGACACGAACAGCCTCATCAGTTCCTGGAACCAGTGGAGCACAAGCCAGGCGAAGCAACTGTTTTTGGGAGTGCCGGCTTCTACAGCAGCTGCTGGAAGTGGATTTGTTCCTTCTGATGTGTTAACCTCCCAGGTTCTTCCTGCCATCAAGAGTTCTTCCAAGTATGGTGGAGTCATGCTGTGGGACAGATTCAATGATGGTCAAACTAAATACAGTGATGCTATCAAAGGAAGTGTTTAG 894 0.5515 MEINMASLKQLSPLLLPLLLISLFKPSNAAGIAVYWGQNGNEGTLADACNTDNYQFVNIAFLSTFGGGQTPQLNLAGHCDPSTNGCTQFSDQIKACQSKGIKVLLSLGGASGSYSLSSADDATQVANFIWNNFLGGQSSSRPLGDAVLDGVDFDIEAGSGEHWDELARVLKGFSSVLLAAAPQCPIPDAHLDSAIKTGLFDYVWVQFYNNPSCQYSSGDTNSLISSWNQWSTSQAKQLFLGVPASTAAAGSGFVPSDVLTSQVLPAIKSSSKYGGVMLWDRFNDGQTKYSDAIKGSV* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1734 297 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 148 156 IPR001579 GO:0004553|GO:0005975
Pvu11g1734 297 PANTHER ENDOCHITINASE 18 297 - -
Pvu11g1734 297 SUPERFAMILY (Trans)glycosidases 27 292 IPR017853 -
Pvu11g1734 297 CDD GH18_hevamine_XipI_class_III 30 295 IPR045321 -
Pvu11g1734 297 Pfam Glycosyl hydrolases family 18 32 284 IPR001223 GO:0005975
Pvu11g1734 297 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 297 IPR001223 GO:0005975
Pvu11g1734 297 Gene3D Glycosidases 30 297 - -
Pvu11g1734 297 PANTHER ACIDIC ENDOCHITINASE 18 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1734 Pvu-Chr11 43710467 43711598 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1734 7 297 Glycoside Hydrolase AT5G24090 59.060 3.64e-129 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1734 K01183 - gmx:100783329 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1734 11 43710467 43711598 Pvu11g1734 11 43710467 43711598 ECH