Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1731 ATGGCTTCTCAAAGACTAGCTTCCATCATACTTCTCTTATCCCTTTTCACCATCTCTTCCTCACACCCTGACAATGGCGGAATTGCTGTGTACTGGGGCCAAGACGGTCGAGAAGGTGATTTGGTAACCGCATGTAACAGTGGAAAGTACAAGATCGTGCTCCTTGCTTTCCTCAACAAGTTCGGTGCAGGGAGAACCCCAGCTTGGAACTTCGCCGGTCACTGCGACAACGGTGCCTGGAAAAAGTGCACCGAACTAGAGCCCGAAATAAAACAGTGCCAGGCGAAAGGCATCAGAGTTCTCCTTTCAATCGGAGGAGCCCCTGACTATTCAAGCTACTCGCTGAGCTCGCCGGAGGACGCAAAGGAGGTGGCCAACTACCTCTACGAAAACTTCCTCAGTGGCCAATATGGTCCACTGGGAAGCGTCGCGTTGGACGGAATCGACTTCGACATCGAAGTGACGGAGGATCACTGGGACGACCTTGCCAGGGAACTCGACTTCTTCCGACGAACGACGGGGCGTTACTTTTACTTGTCCGCCGCCCCTCAGTGCCCAATCCCAATCTACTATCTCGGCAAAGCCATCGCCACCAAACTCTTCGACTACATCTTCGTTCAGTTCTACAACAACCCTAGTTGCTCCTACGTCAGTGGCACCAACGCCCTCTTGAACTCCTGGGACAAGTGGGTCGACTTGGTCCCCTCCAACAACTCGCTCTTCGTGGGCCTGCCAGCAGCGTCCAGCGCCGGCAACGGTTTTATTCCGGCGGAGGTCCTGAACGGCCAGGTGCTTCCGCACGCGAAGCAAGCCTCGAACTACGAGGGAGTGATGCTGTGGGATAGATACCGCGATGTTCAGAATGGGTACAGTGATAAGATACATTCGAATGTGATTAAGTCGAAGTTGCCGGCGTCTGTGGGGTCAGTTTCCGACGGAATTTACCAGTCCGTGTATAAGGCGTAG 966 0.5383 MASQRLASIILLLSLFTISSSHPDNGGIAVYWGQDGREGDLVTACNSGKYKIVLLAFLNKFGAGRTPAWNFAGHCDNGAWKKCTELEPEIKQCQAKGIRVLLSIGGAPDYSSYSLSSPEDAKEVANYLYENFLSGQYGPLGSVALDGIDFDIEVTEDHWDDLARELDFFRRTTGRYFYLSAAPQCPIPIYYLGKAIATKLFDYIFVQFYNNPSCSYVSGTNALLNSWDKWVDLVPSNNSLFVGLPAASSAGNGFIPAEVLNGQVLPHAKQASNYEGVMLWDRYRDVQNGYSDKIHSNVIKSKLPASVGSVSDGIYQSVYKA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1731 321 Pfam Glycosyl hydrolases family 18 28 250 IPR001223 GO:0005975
Pvu11g1731 321 PANTHER ACIDIC ENDOCHITINASE 8 298 - -
Pvu11g1731 321 SUPERFAMILY (Trans)glycosidases 24 293 IPR017853 -
Pvu11g1731 321 Gene3D Glycosidases 24 311 - -
Pvu11g1731 321 CDD GH18_hevamine_XipI_class_III 26 296 IPR045321 -
Pvu11g1731 321 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Pvu11g1731 321 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 301 IPR001223 GO:0005975
Pvu11g1731 321 PANTHER ENDOCHITINASE 8 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1731 Pvu-Chr11 43676866 43678126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1731 9 298 Glycoside Hydrolase AT5G24090 49.329 8.27e-94 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1731 K01183 - gmx:547449 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1731 11 43676866 43678126 Pvu7g0801 7 7269770 7270959 ECH
Pvu11g1731 11 43676866 43678126 Pvu11g1731 11 43676866 43678126 ECH