Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1687 ATGTCAACCAAAGGAAAAGACATAGCAGAAGGATCATCAAGATCTTCTGCTTCTGCTGCTTCTGATCAGCATCAGCATCAGCATCAACAACAACAGCAACAGCAGCAGCACCCTCTGAGTAGATATGAATCTCAGAAGAGGAGGGATTGGAACACTTTTGGGCAGTACTTGAGGAACCAGAGGCCTCCTGTGGCACTTTCACAGTGCAATTCAAACCAAGTGCTGGATTTCCTAAGGTACTTGGACCAGTTTGGGAAAACTAAGGTGCATGCTCAAGGTTGTCTCTTCTTTGGTCAAGTGGAGCCACCTGGTCCTTGCACTTGCCCTCTTAAACAAGCTTGGGGGAGCCTTGATGCTCTCATTGGAAGGCTGAGAGCTGCATATGAAGAAAATGGAGGCTTGCCTGAGACTAATCCATTTGCTAGTGGTGCCATAAGAGTTTATCTTCGTGAGGTTCGAGACTCTCAAGCTAAGGCAAGAGGGATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATCTCATCAAGGCCAACGGGGACAGCTCAAACTTACCTTTGCACCAGTAA 564 0.4663 MSTKGKDIAEGSSRSSASAASDQHQHQHQQQQQQQQHPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNQVLDFLRYLDQFGKTKVHAQGCLFFGQVEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNLIKANGDSSNLPLHQ* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1687 187 MobiDBLite consensus disorder prediction 1 40 - -
Pvu11g1687 187 ProSiteProfiles ALOG domain profile. 41 168 IPR006936 -
Pvu11g1687 187 MobiDBLite consensus disorder prediction 159 187 - -
Pvu11g1687 187 Pfam ALOG domain 33 154 IPR006936 -
Pvu11g1687 187 PANTHER PROTEIN G1-LIKE2 2 186 IPR040222 -
Pvu11g1687 187 MobiDBLite consensus disorder prediction 1 45 - -
Pvu11g1687 187 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1687 Pvu-Chr11 42677706 42680340 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1687 - - gmx:100527554 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1687 11 42677706 42680340 Pvu5g0984 5 28410925 28415389 PCT