Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1574 ATGGCGAAATCGAGCAAAGATCCGACGTATCCACCGATAAAGGCAGACCAATACTTAAACAGCCCGGTTCACTACGCGGTGGCGATTCGTGACCACGCTAAACTTTCTAGAATAATTTCTTCTCTTCCCCGACTTCCCGACCCTGCCCGAGTCATCACAGAGTCCGACTCCCTCGCTCACGAGCGACTCGCGGAAAAAATCTCCGCCGTGCTTGACCGTCGCGACGTGCCGCTCCGCGAGACGCCCCTCCACCTCGCCGTCCGCCTCAACGACATCGTCGCCGCGAGAGCCCTCGCTTCCGCCGGAGCTGACATCTCCCTCCACAATGGTGCTGGCTGGAACCCGCTCCAGGAAGCGCTTTGTCGGCGCGCCTCCGATGTCGCACAGCTCCTCGTTCGCCTCCACCACCGCGCCGCATGGGCGAAGTGGCGGCGACGCCTGCCGCGGCTCGTCGCCGCCCTCCGCCGTATGCGCGACTTCTACATGGAGATCTCGTTTCACTTCGAGAGCTCCGTGATCCCCTTCGTCGGAAAAATCGCTCCCTCCGACACGTACAAAATCTGGAAACGCGACGGCAACCTCCGCGCTGACACCACCCTCGCTGGCTTCGACGGCCTCAAAATCCACCGCGCCGACCAGAGCTTCCTTTTCCTCGGCGACGGCGATGGCAAAGGCAACATCCCCGCCGGGTCTCTCCTCGTGCTCAACCGCGACGATAGAAAAATCCTAGACGCGTTCGAGAATGCCGGAGCTCCGATGAGCGATTCTGACGCGGCGGGGTTCTGCTCACAGAGCAGCGTCTACCGGCCGGGGATGGATGTAACAAAAGCAGAGTTAGTAGGTAGAACCAATTGGAGAAGACAAGAGAAGATGGAGAACGTGGGAGAGTGGAAAGCTAGGGTTTACGAAGTGCATAACGTTGTTTTCAGTTTCCGGTCACGAAAAGTTGCTGCCGGTGAATCTGACGTGGCAGGGAGCGAGCAGGTTTTGCCATTGGAGCTGGATGAAGATGAAGACGGTTTTCTCGTTGCAGAGAATCCGAGTTTTGGAATCCCAGCGGCGAATAATTGCAATGCCGATAAGAGAAGACATAGTAGTTTTGTTCGAGAAGAACGAGAGTGGGTCCCGGTGGGCAGAAAAAGCGTGGATTTGCCTTCCATTTCGTTGGCGCCGCCTAGGAAATCTTCGGCAGTGGCGCCGCCTAAGGCGGAGCCACCTACGAAGGAGAAAGAATATTTGAGAAGTTTGCGGCCGGCGGTGTGGTTGACGGAGCAGTTTCCGTTGAAGACGGAAGAGCTGTTGCCGTTGTTGGACATTCTGGCGAACAAGGTGAAGGCAGTGCGGCGTCTTCGGGAGTTGCTCACGACAAAGTTTCCAGCGGGGAGTTTTCCGGTGAAGGTGGCGATCCCGGTGGTCCCCACGGTGAGGGTGGTGGTCACGTTTACGAAGTTCGTGGAGCTGCAACCTGTGGAGCAGTTCTACACGCCGTTCTCGAGTCCTTCACATTTGCTCAGTGCAGATGATGATGATGATGATCTTGATGGTGATCATAATCGGCAGAAATTAACAAGACAGAGTTCATCATCTTCTGGGGCCTCCACGTGGCTGAGACGAAGTACTAGTAGTAGCCAATCGTGGAGTAAGCACCAACAACGATGTTCTTCCGGGGCTCTGGATTCGGATCCTTTTTCTATTCCTGCTGGATATACGTGGACCAATAGTGGGGATGATTCGTCACGCAAAATGAAGAAGTCCAACTCTGTGAGAAAATCAAAGTGA 1779 0.5571 MAKSSKDPTYPPIKADQYLNSPVHYAVAIRDHAKLSRIISSLPRLPDPARVITESDSLAHERLAEKISAVLDRRDVPLRETPLHLAVRLNDIVAARALASAGADISLHNGAGWNPLQEALCRRASDVAQLLVRLHHRAAWAKWRRRLPRLVAALRRMRDFYMEISFHFESSVIPFVGKIAPSDTYKIWKRDGNLRADTTLAGFDGLKIHRADQSFLFLGDGDGKGNIPAGSLLVLNRDDRKILDAFENAGAPMSDSDAAGFCSQSSVYRPGMDVTKAELVGRTNWRRQEKMENVGEWKARVYEVHNVVFSFRSRKVAAGESDVAGSEQVLPLELDEDEDGFLVAENPSFGIPAANNCNADKRRHSSFVREEREWVPVGRKSVDLPSISLAPPRKSSAVAPPKAEPPTKEKEYLRSLRPAVWLTEQFPLKTEELLPLLDILANKVKAVRRLRELLTTKFPAGSFPVKVAIPVVPTVRVVVTFTKFVELQPVEQFYTPFSSPSHLLSADDDDDDLDGDHNRQKLTRQSSSSSGASTWLRRSTSSSQSWSKHQQRCSSGALDSDPFSIPAGYTWTNSGDDSSRKMKKSNSVRKSK* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1574 592 ProSiteProfiles Ankyrin repeat region circular profile. 78 109 - -
Pvu11g1574 592 MobiDBLite consensus disorder prediction 386 407 - -
Pvu11g1574 592 PANTHER UNCHARACTERIZED WITH ANKYRIN REPEAT DOMAIN 5 592 IPR021832 -
Pvu11g1574 592 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 5 592 - -
Pvu11g1574 592 SUPERFAMILY Ankyrin repeat 16 156 IPR036770 -
Pvu11g1574 592 MobiDBLite consensus disorder prediction 505 592 - -
Pvu11g1574 592 MobiDBLite consensus disorder prediction 522 558 - -
Pvu11g1574 592 Pfam GPCR-chaperone 195 570 IPR021832 -
Pvu11g1574 592 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Pvu11g1574 592 Gene3D - 5 159 IPR036770 -
Pvu11g1574 592 SMART ANK_2a 18 47 IPR002110 GO:0005515
Pvu11g1574 592 SMART ANK_2a 78 107 IPR002110 GO:0005515
Pvu11g1574 592 SMART ANK_2a 111 140 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1574 Pvu-Chr11 39774775 39777399 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1574 K21437 - gmx:100798925 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1574 11 39774775 39777399 Pvu11g1574 11 39774775 39777399 ECH