Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1570 ATGCCAGTCCTAGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTCCAGCTCCTATTTGACAAGCTTGATTCTCATCAACTTCTCCACTACTTTCGTGGGAGAAAGTTGGATGAGAAGCTGCTGAAAAATTTGAGGAGAAAGTTGGTGTCCATCAATGCTGTGGTTGATGATGCAGAACTAAAGCAGTTCAGAAATGCATATGTTAAAGCGTGGCTTGATGAGGTCAGAGACGTGTTGCTGGACACAGAGGATCTGCTGGATGAAATAGACTATGAATTCTCCAAAACTGAGTCAGAACTTCAATACCAAAGCAGTTCTAACAAGGTACGCATTCTTGAACCCAAGCTGAAAGAAGTCCTAGATGACCTTGAATCTCTTTTAAACCAAAAGGATGATCTAGGTCTGAAAAATGTTGGTGTGGGATTGGAATTGGGTAATAAAGTGTTAGAGAAAAGAAATGAATCTTCATCGTTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGACAAAGAAATCATCCTTGATTGGTTGACATCTGACAGTAACAATCATAACAACTTCTCAATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACAGGTATACAATGATCCAATGATAGAGGGCATATTTGCTATCAAAGCTTGGGTTTGCGTTTCTGATGAATTCGATGTTTTCATGTTAACCAGAGCAATTTTTGAGTCAATTCATAAGGAAACTGATAATAGCAGAAACCTAGAAATGGTTCAGGGAAGATTGAAAGAAAAATTGAATGGAATGAAGTTTCTTCTGGTTTTGGATGACGTTTGGAACGAACACCGAGATCAATGGAAATCATTACAAACTCCTCTTAAATATGGTGCTAAGGGAAGTAAAATTCTTATCACAACACGCATTAACAAAGTTGCTTCTATCATGGAGTCAAACAATATTCACCAACTAAAGCAATTAAAAAAAGAACACAGTTGGCAAGTTTTTACTAAACATGCATTTCAAGATGATAACTCTAAGTGGAATTCTGTGTTGGAGAAGATTGGCATGAAGATATCAAAGTCATCTATTTCAGATTGGGAAGGTGTACTGAGAAGCAACATATGGGACTTACCAATAGAAGATAGTAAAATCATCCCCGCTTTGTTATTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCGTTATTCCCCAAAGGCCATAAGTTTGACAAGGAGAGCTTAATTCTATCATGGATGGCTGAAAATTTTCTACAATGCTCTTGGCAAAGCAAGTCTCCAAAAGAAGTAGGTGAACAATACTTTAATGATATGTTATCAAGGTCATTCTTCCAAAAGTCAATTACAGGAGAAGAAATAATGTACAAAAGAACACAATTTGTGATGCATGACCTTCTAAATGATTTAGCAAAATATGTTTCTGGTGAAATATGCTACAGGTTAGGTGTTGATAAACCAGGAAACGTACCAAAGACTACCCGTCACTTTTCAACGGTAAATAATCCTGTTGAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGAACATTTTTGTCCAGGAATTGTGGGATGTCAATACAAGAGTTGATCTCCAACTTTAAATTCTTACGCATCTTATCTTTGTCTTACTCTCTTAACATAAAAGAGGTTCCTGAAACTATAGCCAATCTTATACATCTCCGTTCATTAGACCTTTCAAGCACAGACATAGAGAGACTTCCCGACTCAATTTGTTCACTTTATAACTTGCAAGAGCTGCCCTCGACTTTGCATGAGCTCACTAACTTGCACCTCCTTGAACTTATTGGAAGTTCATTAAGAAAGGCTCCGGTTCTTTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGGTGGGTTTGAGGTTGGCAAAAACAATGAGTCCAATATTGAACAACTAGGAGAACTTGATGTTCACGGAGAGCTGTCAATTAAAAATCTTGAAAATATGGTGAATCCCTGTGATGCATTGGCAGTGGATTTGAAGAATAAAACAAATATTGTGGGGTTACATTTACAATGGAGTTTGAAGCAGAACACTGACGAATCAATAAAGGAAAGAGAAATACTAGAGAATTTGCAACCTTGCAGACATTTGGAGAAGTTATCAATCTATGGCTATGGTGGAACACAATTTCCCCGTTGGTTATCTGATAATTCTCTATTGAATGTTGTGTCCTTAACTTTGAATACCTGTAAACATTGCCTGCAGTTGCCTTCCCTTGGAATTTTAACATCTCTCAAGTACTTGAAAATTTACTGCCTTCATCAAATAGTGAGGATAGATGCTAATTTTTATGGGAATAGCTCATCTGCATTTGCATCCTTGGAAACATTGATCTTTGATGATATGCCGAAATGGGAAGAATGGGAATGCAAGACAAGTGCTTTTCCAAGTCTTAGACATCTTTCAGTGTGGAATTGTCCAAAACTGAAAGGGTACTTGTCAGAACACCTTTCTCATTTAAAGTATCAAACTATTGATGTCTGCAAACAACTTGAGGCTTCGACTCTAGAAATTGAAGGTGTGGAGATGGAGACATCTTCAGTTGATATGCTCCTATCTCATACTCTTCTTCAATCCTTAACTATTTATTGTTGTCGGGGCATTAATATTCCCATAAACCATTGCTACCATTTTCTTGTAGAATTGCGTATCATTAAATGTTGTGACTCTCTCACTAACTTCCCTCTAGACTTGTTTCCGAAACTCTGCTACCTTAGTTTAGGCAGATGTCATAACCTGCAAATGATATCACAGGGGCACCCTCACGGTCATTTGAAGAGTCTGATAATTAAAAAATGCTCTGAATTTGAATCATTTCCCAATGAAGGATTATTTGCACCTGAGCTAGAGACATTTCATATTGAAGAATTGGAAAAATTGAAATCAATGCCTAAATGCATGTCTTCCCTACTTCCATCTCTTAGTTATCTGCATATAAAGGATTGTCTAGGAGTGGAGTTGTCTGACGGATGTATGCCATTAAATCTAAAACACATCTATCTCTTGAATTGCTCTAAAGTTGTTGCCTCACTAAAAGAACGGGGTTTGCTCCCAGTCTCCCTTACTAAGCTACACATAAAAGATTGTCCAAATCTTAAGAAACTGAACTACAGGGGTCTCTATCACCTCTCTTCTCTTCAGAAATTGTTGCTCAGTAACTGTCCAATACTCCAATGTTTGCCAAAGGAGGGCCTTCCAGAATCCATTTCACAACTCAAAATTACAAATTGTCCGTTGCTCAAACAACGGTGCAAGAAAAATGAAGGTAAAGACTGGGAAAAGATTACTCACATTAAAACTATATGGCTTGATAGGAAAGCGATAAACAAATATTGTTGA 3405 0.3771 MPVLETLGGALFGAVLQLLFDKLDSHQLLHYFRGRKLDEKLLKNLRRKLVSINAVVDDAELKQFRNAYVKAWLDEVRDVLLDTEDLLDEIDYEFSKTESELQYQSSSNKVRILEPKLKEVLDDLESLLNQKDDLGLKNVGVGLELGNKVLEKRNESSSLVAEEVIYGRDEDKEIILDWLTSDSNNHNNFSILSIVGMGGMGKTTLAQQVYNDPMIEGIFAIKAWVCVSDEFDVFMLTRAIFESIHKETDNSRNLEMVQGRLKEKLNGMKFLLVLDDVWNEHRDQWKSLQTPLKYGAKGSKILITTRINKVASIMESNNIHQLKQLKKEHSWQVFTKHAFQDDNSKWNSVLEKIGMKISKSSISDWEGVLRSNIWDLPIEDSKIIPALLLSYYHLPSHLKRCFAYCALFPKGHKFDKESLILSWMAENFLQCSWQSKSPKEVGEQYFNDMLSRSFFQKSITGEEIMYKRTQFVMHDLLNDLAKYVSGEICYRLGVDKPGNVPKTTRHFSTVNNPVECDEYRSLCDAKRLRTFLSRNCGMSIQELISNFKFLRILSLSYSLNIKEVPETIANLIHLRSLDLSSTDIERLPDSICSLYNLQELPSTLHELTNLHLLELIGSSLRKAPVLLGKLKNLQVWMGGFEVGKNNESNIEQLGELDVHGELSIKNLENMVNPCDALAVDLKNKTNIVGLHLQWSLKQNTDESIKEREILENLQPCRHLEKLSIYGYGGTQFPRWLSDNSLLNVVSLTLNTCKHCLQLPSLGILTSLKYLKIYCLHQIVRIDANFYGNSSSAFASLETLIFDDMPKWEEWECKTSAFPSLRHLSVWNCPKLKGYLSEHLSHLKYQTIDVCKQLEASTLEIEGVEMETSSVDMLLSHTLLQSLTIYCCRGINIPINHCYHFLVELRIIKCCDSLTNFPLDLFPKLCYLSLGRCHNLQMISQGHPHGHLKSLIIKKCSEFESFPNEGLFAPELETFHIEELEKLKSMPKCMSSLLPSLSYLHIKDCLGVELSDGCMPLNLKHIYLLNCSKVVASLKERGLLPVSLTKLHIKDCPNLKKLNYRGLYHLSSLQKLLLSNCPILQCLPKEGLPESISQLKITNCPLLKQRCKKNEGKDWEKITHIKTIWLDRKAINKYC* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1570 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 405 IPR027417 -
Pvu11g1570 1134 Gene3D - 145 363 IPR027417 -
Pvu11g1570 1134 Pfam NB-ARC domain 170 361 IPR002182 GO:0043531
Pvu11g1570 1134 SUPERFAMILY L domain-like 873 1118 - -
Pvu11g1570 1134 PRINTS Disease resistance protein signature 191 206 - -
Pvu11g1570 1134 PRINTS Disease resistance protein signature 264 278 - -
Pvu11g1570 1134 PRINTS Disease resistance protein signature 1063 1079 - -
Pvu11g1570 1134 PANTHER DISEASE RESISTANCE PROTEIN RP 32 961 IPR044974 GO:0006952
Pvu11g1570 1134 Gene3D Ribonuclease Inhibitor 857 1125 IPR032675 -
Pvu11g1570 1134 Gene3D - 16 130 - -
Pvu11g1570 1134 PANTHER OS05G0414200 PROTEIN 32 961 - -
Pvu11g1570 1134 Pfam Rx N-terminal domain 13 102 IPR041118 -
Pvu11g1570 1134 Gene3D Ribonuclease Inhibitor 505 599 IPR032675 -
Pvu11g1570 1134 Gene3D Ribonuclease Inhibitor 600 856 IPR032675 -
Pvu11g1570 1134 Coils Coil 42 62 - -
Pvu11g1570 1134 SUPERFAMILY L domain-like 472 850 - -
Pvu11g1570 1134 Coils Coil 117 137 - -
Pvu11g1570 1134 Gene3D - 385 483 IPR036388 -
Pvu11g1570 1134 CDD AAA 166 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1570 Pvu-Chr11 39723136 39726704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1570 - - pvu:PHAVU_011G193600g 1529.61