Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1557 ATGAGGGGTCCTTTGGGTGCAGTCATAGGTAGGTTCCCATCGAGTGACGGAGTTACCCAAATGGGTGGAATCATAAGACGCAACAGGAAATGCAGGGACATCACTGTGCTTGTGATCTTCATAGCTTTTTCGGTAGCAATGGTTGTCAATTCCAGCTTTGCTTTCAACCAAGGAAACCCACTAAGGCTTACTTATGGACTCGACTACAAAGGGAATGTGTGTGGGGACAAGAATGCTCACCCAGGCCTCAGTGACTTGGTGCTCAGATATTGGCAAAATCCTAATCAGGTTTATGAGAGTGGATTGAAGGATAGCAAATTCAAACTGGGGGATGCCCGCAGTATATGCTTGTCTGAGTGCCCTATACCTTCCGAAGATTCCCTTAATTGGGTGTGTGATTATCCAGAAGGAGATATTCGTCTTTCCATGACAGATTGGGCTAATAGGAACTATGATTATTTCGAGTTCCTTACACCAGAAATGAGAAATTCCTCTCTTCAACTTCAGGGTCCATGCTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCTCGAGCATCAAACACGTCTTTGAAGCATTGGCAACAGATGGGCGGAGTTAACATCAATGAAGACATTGTTATTGATAAGTCTATTCACAAGTCTATTAATTCTCGGTCTGCTGTTTTAAAGAGATACATGGCAGACATAGGAAAGGCATGGCCTGTGCTGATTGTTTGTGGAGGGATTTTGCCTCTTCTTCTGTCTGTGATTTGGTTGATGATGATTCGACATTTTGTTGCTGCAATGCCTTGGATAACAGTTGTTCTCTTTAATGTTCTAATAATATCTGTCACAATGTTCTACTACCTAAAAGCTGGATGGATTGGAGATGATGCTATTTCTCCCATCATTGGTGAACATGACCCTTACATTAGTGTATATGGGAGGGAGCTGACTCATTTACGAGCTGTCACTATACTTATGACCTTTATCATGGTTGTTGCCTTCCTTACATCAATTGCTATTGTTCGACGCATCCTTATGGCAACATCGGTCTTGAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCCCTCATTATTTTCCCACTCATACCATACGGTATCCTTGTTGTGTTTTACATGTTCTGGATTTCAGCTTCTCTTCATATGTTCAGCTCTGGCCAGGTTGTTCAGAATAATTGCAACTCTAACTGCTGCACATATGATCTTGCTGCAAAACGGGTGAACTGTGATCGTTGTTGTGGTTATAGCATTCATTACACACCACATATTGGAGTTGCCATCCTTTTCCACCTATTTGGCTGTTATTGGGTTACACAATTTTTCATAGCTTGCTCCTCGACAGTGATTGCTGGATCTGTTGCGTCGTATTACTGGGCCCATGGTGAAACATCTCCAGAAATTCCTTTTCTTTCTGTCTTTTCCTCCATGAAGCGGCTTATGCGGTACAGTCTCGGGTCTGTGGCTCTTGGCTCTCTGATTGTATCATTTGTAGAATCAATACGCTTTCTGCTTGAAGCTATTCGTCGCAAACTAAAAGGCTCAAGTGATGGGCACGACAGTTGCATAGGCAAGGCTGCATACCAATCTTCACAATGTCTTCTCAAGTGTATTGAATGGACCATGAAATCAGTAAATCGAAATGCTTACATCATGATTGCTATAACAGGCAAAAGTTTCTTTGGTGCTTCTTCTATTGCGGCAGATCTGATAATGAATAATATTCTAAAGATTGGTCGTCTTAACGTGATTGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCATGTGCTTTGTTTGCATTCCTCATGTTAGACACTCACAAGTACAAATCTGCTCATAACAAGACATCGTCTCCACTCTTACCTGTTGTGGTTTGTTGGGCTCTTGGATACATTGTTGCAACCCTTTTCTTTGCAGTTGTGGAGATGTCAATTGATACCATAGTTCTCTCATTCTGCCAGGATTCTGAAGAGCACCAAGGAACAGCCCAGTATGCACCACCCCTTCTCATTGATACTCTCACTGACCAGAGTGAAATGCAGAGACTCACACAAGGACCCCAATGA 2103 0.4237 MRGPLGAVIGRFPSSDGVTQMGGIIRRNRKCRDITVLVIFIAFSVAMVVNSSFAFNQGNPLRLTYGLDYKGNVCGDKNAHPGLSDLVLRYWQNPNQVYESGLKDSKFKLGDARSICLSECPIPSEDSLNWVCDYPEGDIRLSMTDWANRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNTSLKHWQQMGGVNINEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLIVCGGILPLLLSVIWLMMIRHFVAAMPWITVVLFNVLIISVTMFYYLKAGWIGDDAISPIIGEHDPYISVYGRELTHLRAVTILMTFIMVVAFLTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLIPYGILVVFYMFWISASLHMFSSGQVVQNNCNSNCCTYDLAAKRVNCDRCCGYSIHYTPHIGVAILFHLFGCYWVTQFFIACSSTVIAGSVASYYWAHGETSPEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLEAIRRKLKGSSDGHDSCIGKAAYQSSQCLLKCIEWTMKSVNRNAYIMIAITGKSFFGASSIAADLIMNNILKIGRLNVIGDVILFLGKLCVSLSCALFAFLMLDTHKYKSAHNKTSSPLLPVVVCWALGYIVATLFFAVVEMSIDTIVLSFCQDSEEHQGTAQYAPPLLIDTLTDQSEMQRLTQGPQ* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1557 700 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 697 IPR007603 GO:0022857|GO:0055085
Pvu11g1557 700 Pfam Plasma-membrane choline transporter 326 669 IPR007603 GO:0022857|GO:0055085
Pvu11g1557 700 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1557 Pvu-Chr11 39416128 39426213 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1557 K15377 - gmx:100815939 1323.92