Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1556 ATGCAGCCTTACCAGAACCTTCCTGCACTGGATTCCGACCCGCAGCTGCCCCAAATCAAAATCCACCATCCCTCTTCACCCCGTCACCCCTCCCCTGCGGGGGCAACCCCCACGCCCACCGCCGGCGCGCGCCGCAAAATCGGCGTGGCCGTGGACCTCTCCGACGAGAGCGCCTACGCGGTGCGCTGGGCCGTACATCACTACATCCGTCCCGGTGACGCCGTGATCCTGCTCCACGTCAGCCCTACTAACGTCCTCTTCGGCGCCGACTGGGGCTCTATCGACCTCTCCATAAACACCGACCCGAATTCCGATGAGGAGGCCGTTAACGCTGTGAACAATAACGACCACACCAGCAAGCGCAAGCTGGAGGACGACTTCGACGCGTTCACGGCGTCGAAGGCCGCGGATCTCGCGAAACCGTTAAGGGAAGTGCAGATTCCGTTCAAGATCCACATCGTGAAGGACCACGACATGAAGGAGAGACTGTGTTTGGAGGTGGAGAGGCTCGGGCTGAGCGCGGTCATCATGGGGAGCCGTGGGTTTGGTGCTGTGAGGCGCGGGAGCGATGGGAAGCTTGGGAGTGTGAGTGATTACTGTGTGCATCACTGTGTTTGTCCTGTGGTTGTTGTGCGTTATCCTGATGATCTTGCTGCGACGGCTGAGGCCGTTGTGGCGGTGAAGGAGGGGGATGGGAGCGAGGCGGTGGTCCAGCCCCACAAGAAAGAGGATTAG 735 0.6082 MQPYQNLPALDSDPQLPQIKIHHPSSPRHPSPAGATPTPTAGARRKIGVAVDLSDESAYAVRWAVHHYIRPGDAVILLHVSPTNVLFGADWGSIDLSINTDPNSDEEAVNAVNNNDHTSKRKLEDDFDAFTASKAADLAKPLREVQIPFKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAVRRGSDGKLGSVSDYCVHHCVCPVVVVRYPDDLAATAEAVVAVKEGDGSEAVVQPHKKED* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1556 244 PRINTS Universal stress protein signature 44 62 IPR006015 -
Pvu11g1556 244 PRINTS Universal stress protein signature 190 212 IPR006015 -
Pvu11g1556 244 MobiDBLite consensus disorder prediction 1 41 - -
Pvu11g1556 244 PANTHER OS01G0783500 PROTEIN 5 233 IPR044162 -
Pvu11g1556 244 Pfam Universal stress protein family 44 212 IPR006016 -
Pvu11g1556 244 CDD USP_Like 46 199 - -
Pvu11g1556 244 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 215 - -
Pvu11g1556 244 PANTHER UNIVERSAL STRESS PROTEIN PHOS32 5 233 - -
Pvu11g1556 244 Gene3D HUPs 38 224 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1556 Pvu-Chr11 39388297 39393635 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1556 - - pvu:PHAVU_011G149900g 441.425