Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1550 ATGGATACTATAGCGAGCGTGGCATCAAGTGTGGCTGCACCTCTGCTGCGAAACCTCACATACGTGTTGATGTACAGCACTTACCTGACAGAGCTGGAAACCGAGATTAAGAGGCTGCAGAGTGAGGAGAAGGAAGTGAGGCACACAGTTGAAGCTGCCAAAAGGGGTGGTGAAGAGATCGAGGACACCGTGCGTGACTGGTTCGACCGAGTGCATGCAGCTGTGGAGCAGGGGCAGGCCTTTCTTCAGGAGGAAGAGAGGGAAAGGGTTGGGTGCATGGATGTGTACTTGAAGTACACCAACAGCCAGAGAGCGAGAACCTTGGTGGAGATTGTGAGGGAGGTAAGGAAAGAGACGTTTGACCGTGTTTCCTACAGGCGTGCCTTGAGATGCAATGTTAGTCCTGCTGCAAGAGAGTATGTTGCTATTCAATCGAGAACTGAGATGTTGAATGATGTTGTGAAGGTGTTGAAGGATGATGGGGTTGACATTGTTGGAGTGTATGGAATGGCCGGTGTGGGGAAAACTGCATTGGTGAAGGAATTGGCCTGGCAGGTTGAGAAGGATGGCTTGTTTGATGCGGTGGTGGTGGCCACAGTGACGAATTCGCCGGATGTGGGAAGGATCCGCAACGAGATTGCTGATGGGTTGGGGTTGAAGTTTGATGAGCTGACGGAGCTGGGGCGAGCGAGCCGGTTGCGCCAGAGGATTCGGCAGGAGCAGAAAATTCTTGTGGTGTTGGATGATATGTGGGAGAAGCTTGATTTGACAAAGGTTGGTGTGCCTTTTGGTGAGGACTACAAAGGTTGCAAATGCCAGTTGCTGATCACATCCAGGAATCTTAACGTGTTGAGTTCTAATTTTGGGGCAGGAAAGTTTTATAGGCTTGAGGTGTTGTCTGAGGATGAAAGTTGGGAGTTGTTTGAGAAAAGGAGAGGGGTTGTGGTTAGGGATCCTAGCATTCAATCAGTGGCCAAAAAAGTAGCGAAGAGCTGTGGTGGATTGCCTCTTTTGATAGTCACAGTGGTGGAGGAATTGAAGAACAAGGATTTATATGCTTGGAAGGATGCATTGGAGCAGATAACAAGTTTTGAAGTTGAAGGGTGCCTTTATTCTCGTTTTCGTTCTGCTATTGAGCTGAGTTATGACCATTTGGAAAGTCATGAACTAAAAACTTTCTTCCTGCTTTTGGGTTCCATGGGAAATGGATGCCGCACAAGAGATTTGTTGGTGTTTGGTTGGTGCCTGGGACTGCACAAACATGTCGATTCATTGGCAGATGGGAGAAACAGGCTTTACAAATTGATAGACAACCTGAGAGCTGCTTGTTTGTTACTTGACGACGGGGAAAGAGATTCAGTGGTGGCGCTTGAGGTGGTTCGACATGTGGCTGCCTCTATTGCATCCAGGGTCAAACCTTTCTTTACGGTGCAGAGAAACAAGGAATTGAAATGGCCAAGAATGGATTTCTTTAGAACTTGTCATCATATTTTCTTAGACTGGTGTTATATCCGCAAACTTCCTGAGGTGTTAGAATGTCCCAACTTGAAGATACTCCAAATTAATAGTCAAGGTAACTATTTGAAAATCCCCGATGATTTCTTTGTTCAGATGAAAGAGTTGAAGGTGCTGAGTTTAGGAGGTCTAAATTGTACTCCATCGCTCCCTCCGTCTCTCAGTCTCTTGACAGACCTCCAAGCATTTTATCTGTGTAAGTGCATGTTGGAAGACATAGCAACTGTTGGAGAAATCACAAGTTTAGAGATTCTCAGCTTGGAGAAATCTGAGCTTAAAGAGCTCCCTGCCGAAATAGGAGGATTAAGTAATCTTCGGTTGCTAGATTTGACCGATTGCTCAACACTAGGAGGAATTCCTGGCAACGTGATATCGAGGTTGACAAGCTTGGAAGAGCTCTACATGGGAAACTGTGATGTTCAAGGGGAAGCGAGAGAAAGCAAAAGCGAAAACAATGATTTAAGTCTAGGTGAGTTAAAGCATTTGAATCAAGTAACAACTTTGAACGTGCAGATAGAAGATACTTCAGTTTTTCCTAGAGACATGCTTAGCTTTGGGAGACTAGAAAGCTACAAGATTTTGATTGGGGATGGTTGGAAATGGTCAGGGGTGGAGTCTGAGAATTACAAAGCTTCAAGACTTCTTAAGTTAAATTCGGGTGCAGATCCAAGCATTCTAAAGGACTATGGGATAAAGATGTTGATGACTAAGGCTGAAGATTTGTATTTAGCTGAACTCAAGGGTGTTCGAGAAGTACTTTACGAATTGAATGATGAAGGGTTTTCACAATTGAAGCATCTTTGCATCCTAAACTGTGCTGAAATGGAGAGCATTATTGGCTCAACGGAGTGGGCTTATAGTGATCATGCCTTCCCAAACTTGGAATCATTGATCCTTCACAACCTGATTAACATGGAGAGGATATGCAGTGACCCCCTTCCAGCACAGGGCTTTATCAAACTTCAAGTTATCAAAGTAAAGGGTTGTGATAGGATGGAGTTTCTTTTCTCGCATTCCATGGTTAAACACCTTTCTGAACTTGTTGAGATTGAGATTTCTGAATGCAAATCTATGACCAATATCTTATCTGGGCAAAGACAAGAGGATGCTGATGCTGGACAAACCGACAAGATCAGGCTCATCAACTTGCGTTCACTGACTCTACAATGCTTACCTTCTCTTGTTAGTCTCTCTCCTGAGTCAAGTACCGAGGCTCCTCAAAACGGCACTGGTTTCTCCAGTCAACTTTTTAATGACAAGGTTGAATTTCCAAACCTGGAGACCTTGAAGCTGTATTCAATCAATATCCACAACATATGGAATCACCAGCTTTCTTACTTTCAAAATTTGACCTCTTTGACAGTAGATGGATGTGAACGGTTGACATGTATTTTCTCATACCCTGTGGCTATAAAACTTGTCAAGCTTGAACATCTTTTACTTAGTTCGTGCAAACTCGTTGAAAAGATATTTGAGCCGGATGAAAACCTGGGTCACGTTCATCATTTTAGAAAATCCGCTCCAACTGAACTGGCTCCAATTTTCCCCAACCTGGAGACATTTGTGATTTCTGAAATGGACAACTTGATATCAATATGGCCAGGCCTACTCCCTCAAAATTCGTTTTGTAAACTGAAAAAGATGGAAATCACATCCTGCAACAATCTCTTGAATGTGTTCCCATGTCATGTGCTAGACAAATTGCAGAGCCTGGAATCACTGAATGTATGGAACTGTATGGCACTGGAAGTTGTATATGAAATTGATGGTATAAACACAGAGCAAGAAGGTAGCAGTCAAGGAGGACTGGACATTCCACTGAGAACTTTGTCTTTGGGTAATTTACCAAAGCTAAAGCATTTGTGGAATAAGGATCCTCAAGGAAATATCAGATTTCAAAACCTGTTTATGGTAAAAGCTTCTAAATGTAAAAGTCTAAATTATGTGTTTCCATTGTCTCTGGCCAAAGACCTTCTGCATCTCCAATTCCTTGAGATAAGTGATTGTGGGGTAGAGGAAATTATTGTCAGTGATAAGGAACGGGTAGAGGCAGCTCTTGGGTTTGTTTTCCCAAAATTAGTATCCATAAAATTTTTTAAGTTGCCAGACCTTCGATGCTTTTGCAGTGGAAATCACAACCTCAGATTTCCATTGTTGAATCTATTTTATGCTGTTGAATGCCCTGCAATGGAGACTTTCTCTTGGGGAATTTTAAGGGCATCGATCCTTAGAAAAATACATTTGACTCGGGAAGGAGATCAGTGGTACTGGGAAGGTGACCTTAATACAACTATAAGAAAGCTTTTCAATAGAGATCTCCAAGCAAGATTAAGCACTCTATAG 3858 0.4316 MDTIASVASSVAAPLLRNLTYVLMYSTYLTELETEIKRLQSEEKEVRHTVEAAKRGGEEIEDTVRDWFDRVHAAVEQGQAFLQEEERERVGCMDVYLKYTNSQRARTLVEIVREVRKETFDRVSYRRALRCNVSPAAREYVAIQSRTEMLNDVVKVLKDDGVDIVGVYGMAGVGKTALVKELAWQVEKDGLFDAVVVATVTNSPDVGRIRNEIADGLGLKFDELTELGRASRLRQRIRQEQKILVVLDDMWEKLDLTKVGVPFGEDYKGCKCQLLITSRNLNVLSSNFGAGKFYRLEVLSEDESWELFEKRRGVVVRDPSIQSVAKKVAKSCGGLPLLIVTVVEELKNKDLYAWKDALEQITSFEVEGCLYSRFRSAIELSYDHLESHELKTFFLLLGSMGNGCRTRDLLVFGWCLGLHKHVDSLADGRNRLYKLIDNLRAACLLLDDGERDSVVALEVVRHVAASIASRVKPFFTVQRNKELKWPRMDFFRTCHHIFLDWCYIRKLPEVLECPNLKILQINSQGNYLKIPDDFFVQMKELKVLSLGGLNCTPSLPPSLSLLTDLQAFYLCKCMLEDIATVGEITSLEILSLEKSELKELPAEIGGLSNLRLLDLTDCSTLGGIPGNVISRLTSLEELYMGNCDVQGEARESKSENNDLSLGELKHLNQVTTLNVQIEDTSVFPRDMLSFGRLESYKILIGDGWKWSGVESENYKASRLLKLNSGADPSILKDYGIKMLMTKAEDLYLAELKGVREVLYELNDEGFSQLKHLCILNCAEMESIIGSTEWAYSDHAFPNLESLILHNLINMERICSDPLPAQGFIKLQVIKVKGCDRMEFLFSHSMVKHLSELVEIEISECKSMTNILSGQRQEDADAGQTDKIRLINLRSLTLQCLPSLVSLSPESSTEAPQNGTGFSSQLFNDKVEFPNLETLKLYSINIHNIWNHQLSYFQNLTSLTVDGCERLTCIFSYPVAIKLVKLEHLLLSSCKLVEKIFEPDENLGHVHHFRKSAPTELAPIFPNLETFVISEMDNLISIWPGLLPQNSFCKLKKMEITSCNNLLNVFPCHVLDKLQSLESLNVWNCMALEVVYEIDGINTEQEGSSQGGLDIPLRTLSLGNLPKLKHLWNKDPQGNIRFQNLFMVKASKCKSLNYVFPLSLAKDLLHLQFLEISDCGVEEIIVSDKERVEAALGFVFPKLVSIKFFKLPDLRCFCSGNHNLRFPLLNLFYAVECPAMETFSWGILRASILRKIHLTREGDQWYWEGDLNTTIRKLFNRDLQARLSTL* 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1550 1285 PANTHER DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) FAMILY PROTEIN 1 1252 - -
Pvu11g1550 1285 Coils Coil 29 49 - -
Pvu11g1550 1285 SUPERFAMILY RNI-like 885 1175 - -
Pvu11g1550 1285 Pfam NB-ARC domain 147 383 IPR002182 GO:0043531
Pvu11g1550 1285 Gene3D Ribonuclease Inhibitor 471 655 IPR032675 -
Pvu11g1550 1285 PANTHER - 1 1252 - -
Pvu11g1550 1285 Gene3D Ribonuclease Inhibitor 879 1068 IPR032675 -
Pvu11g1550 1285 Gene3D Ribonuclease Inhibitor 656 875 IPR032675 -
Pvu11g1550 1285 PRINTS Disease resistance protein signature 164 179 - -
Pvu11g1550 1285 PRINTS Disease resistance protein signature 237 251 - -
Pvu11g1550 1285 PRINTS Disease resistance protein signature 332 346 - -
Pvu11g1550 1285 PRINTS Disease resistance protein signature 605 621 - -
Pvu11g1550 1285 CDD AAA 146 281 - -
Pvu11g1550 1285 SUPERFAMILY L domain-like 491 889 - -
Pvu11g1550 1285 Gene3D - 122 288 IPR027417 -
Pvu11g1550 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 396 IPR027417 -
Pvu11g1550 1285 Gene3D - 298 386 IPR042197 -
Pvu11g1550 1285 SMART AAA_5 161 302 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1550 Pvu-Chr11 39161241 39166383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1550 537 727 Receptor kinase-like Gene Family AT4G13920 28.251 1.05e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1550 - - gmx:100814903 2071.97