Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1545 ATGGCTCTCCAGGCTGCTTCTTTGGTTTCTGCTTCTTTCTCTGTTGCCAAAGAGGGAACTGCCACGTCTCTCAGGAACACCACAATGTTTGGTCTTTCAATGGCAGACGCTCTCAAAGCCGACTTCAGCTCTCCCTCATTTTCATGCAAAAGGGAATTCCAGCAGAAAAATTGTCCTTTAAGGGTCCAATCAGTGGCAACAACTCCAGGAGTCACAAAGGCTTCTCCAGAAGGCAAGAAAACATTGAGGAAAGGAAGTGTTATTATCACTGGAGCTTCCTCTGGATTGGGCTTGGCCACTGCTAAGGCTTTGGCTGAGACAGGAAAGTGGCATGTGATAATGGCTTGCAGGGATTTCCTGAAAGCTGAAAGGGCTGCAAAAGCTGCTGGCATGGCTAAGGAAAACTACACTGTTATACATTTGGACCTTGCCTCCCTTGATAGTGTCAGACAATTTGTGTACAACTTCAGGCAATCAGGCAGGCCACTGGATGTGCTTGTTTGCAATGCTGCAGTTTACTTGCCAACTGCTAGTGAACCTACATACACTGCCGATGGCTTCGAACTCAGTGTTGGAACAAACCATTTGGGCCATTTCCTGCTTTCTCGCCTATTGCTTGAGGACTTGAACAAATCTGATTACCCTTCTAAGAGGTTGATCATTGTTGGCTCAATTACAGGAAACACAAACACCTTGGCAGGAAATGTGCCACCAAAGGCTAACCTTGGTGACATGAGGGGACTAGCTGCAGGCTTGAATGGACTAAACACTTCAGCCATGATAGATGGAGGATCCTTTGATGGCGCAAAGGCGTACAAGGACAGCAAAGTCTGCAATATGCTTACCATGCAAGAATTCCACAGAAGATTCCATGAAGAAACTGGAATCACATTTGCTTCCCTCTACCCGGGTTGCATTGCAACAACAGGCTTGTTCAGAGAACACATTCCCTTATTCAGACTTCTCTTCCCTCCATTCCAAAAGTACATAACCAAGGGCTTTGTCTCAGAAGATGAATCAGGAAAGAGGCTTGCACAGGTTGTGAGTGATCCAAGCCTAACAAAATCAGGTGTTTACTGGAGCTGGAACAAGGCCTCTGCTTCATTTGAAAACCAATTGTCACAAGAGGCTAGTGATGCAGATAAAGCTCGCAAGGTTTGGGAGATCAGTGAGAAACTTGTTGGTTTGGCTTAA 1194 0.4598 MALQAASLVSASFSVAKEGTATSLRNTTMFGLSMADALKADFSSPSFSCKREFQQKNCPLRVQSVATTPGVTKASPEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKAAGMAKENYTVIHLDLASLDSVRQFVYNFRQSGRPLDVLVCNAAVYLPTASEPTYTADGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDMRGLAAGLNGLNTSAMIDGGSFDGAKAYKDSKVCNMLTMQEFHRRFHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEDESGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDADKARKVWEISEKLVGLA* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1545 397 Gene3D - 70 397 - -
Pvu11g1545 397 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 1 396 - -
Pvu11g1545 397 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 83 397 IPR005979 GO:0016630
Pvu11g1545 397 PRINTS Glucose/ribitol dehydrogenase family signature 86 103 IPR002347 -
Pvu11g1545 397 PRINTS Glucose/ribitol dehydrogenase family signature 161 172 IPR002347 -
Pvu11g1545 397 PRINTS Glucose/ribitol dehydrogenase family signature 294 311 IPR002347 -
Pvu11g1545 397 CDD LPOR_like_SDR_c_like 84 396 - -
Pvu11g1545 397 PANTHER - 1 396 IPR005979 GO:0016630
Pvu11g1545 397 Pfam short chain dehydrogenase 87 229 IPR002347 -
Pvu11g1545 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 363 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1545 Pvu-Chr11 38889759 38892592 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1545 K00218 - gmx:100804565 706.057