Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1544 ATGTTACTTCCGTCAATCATGGACAACCCAATCGCTGCCCAAGATTTCACCTACCTTTCCGGCTTCGGAAACCACCTCTCCTCCGAGGCTCTCCCCGGAGCTTTGCCGGAGGGGCAGAACAGCCCTCTCATCTGCCCCTTCGGTCTCTACGCCGAGCAAATCTCCGGCACCTCCTTCACCTCCCCTCGCAACCGCAACCGCTGCAGTTGGTTTTACCGGATCAAACCATCGGTGACCCACGAACCGTTTAAACCTAGAGTACCTAGTAACTGGAAAATTTTCAGTGAGTTCAACAGCTCCAACAGTTCTGCTAACCCAACTCAGCTTAGATGGAAGCCCATGGATGCACCTGATTCACCAACGGATTTCATTGATGGGTTGTCCACCATTTGTGGTTCTGGAAGCTCTTTCATGCGCCACGGATATGCTATTCACATGTACGCTGCAAACAAATCAATGGACAATTGTGCCTTTTGCAATGCTGATGGTGACTTCTTGATAGTTCCCCAACAAGGAAGACTCTTAATCACCACTGAATGTGGAAGGTTGAAAGTTTCCCCGGGTGAAATTGCTATACTACCTCAAGGTTTTCGTTTTTCTGTGAATCTGCCTGATGGTCCTTCGCGTGGTTATGTTGCTGAAATATTTGGTACTCATTTTGAACTTCCTGATCTGGGACCAATAGGTGCTAACGGTCTTGCTGCGCCAAGGGATTTCCTTGTTCCTACTGCATGGTTTGAAGATAAATCCTATCCTGGCTACACTATAGTGCAGAAGTTTGGTGGTGAACTGTTTGCCGCAGTTCAAGATTTCTCTCCCTTTAATGTTGTTGCTTGGCATGGTAATTATTTTCCATATAAGTATGATTTAAGCAAATTCTGCCCTTATAATACGGTTCTGTTTGATCATAGTGATCCATCAATCAATACTGTGCTGACAGCACCAACTGACAAACCTGGAGTGGCATTACTTGATTTTGTCATTTTCCCACCCAGATGGCTGGTTGCTGAGCACACTTTCCGGCCTCCATATTATCATCGCAACTGCATGAGTGAATTTATGGGCCTCATTCATGGTGGCTATGAGGCCAAGGCTGATGGATTTCTTCCTGGTGGTGCAAGTCTCCATAACTGTATGACTCCCCATGGTCCCGATACCAAGTCATATGAGGCTACCATTGCTCGAGGTAATGATATAGGACCTTCCAAGATCACAGACACAATGGCTTTTATGTTTGAATCAAGTTTAATACCTCGGATCAGTCAATGGGCCCTAGAATCACCCTTCTTGGATCAAGATTATTACCAGTGTTGGATTGGCCTGAGATCTCATTTTACAGTTAAAACCAGAGCATGCGGAATGGACAGTAAGGAGTGA 1377 0.4604 MLLPSIMDNPIAAQDFTYLSGFGNHLSSEALPGALPEGQNSPLICPFGLYAEQISGTSFTSPRNRNRCSWFYRIKPSVTHEPFKPRVPSNWKIFSEFNSSNSSANPTQLRWKPMDAPDSPTDFIDGLSTICGSGSSFMRHGYAIHMYAANKSMDNCAFCNADGDFLIVPQQGRLLITTECGRLKVSPGEIAILPQGFRFSVNLPDGPSRGYVAEIFGTHFELPDLGPIGANGLAAPRDFLVPTAWFEDKSYPGYTIVQKFGGELFAAVQDFSPFNVVAWHGNYFPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKADGFLPGGASLHNCMTPHGPDTKSYEATIARGNDIGPSKITDTMAFMFESSLIPRISQWALESPFLDQDYYQCWIGLRSHFTVKTRACGMDSKE* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1544 458 CDD cupin_HGO_N 109 217 - -
Pvu11g1544 458 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 13 447 - -
Pvu11g1544 458 SUPERFAMILY RmlC-like cupins 15 447 IPR011051 -
Pvu11g1544 458 Gene3D Jelly Rolls 279 416 IPR014710 -
Pvu11g1544 458 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 13 447 IPR005708 GO:0004411|GO:0006559|GO:0006570
Pvu11g1544 458 Pfam Homogentisate 1,2-dioxygenase N-terminal 17 290 IPR046452 -
Pvu11g1544 458 TIGRFAM hmgA: homogentisate 1,2-dioxygenase 16 445 IPR005708 GO:0004411|GO:0006559|GO:0006570
Pvu11g1544 458 Pfam Homogentisate 1,2-dioxygenase C-terminal 291 445 IPR046451 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1544 K00451 - gmx:100801346 867.84