Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1539 ATGGATCGCGGGAAAAATGTTGCTTCAAATTCATCTGGTTCTTATCGAGAGTTCATGAAGTGGACGGCGGAGATGAACCTAATTTTGCTTAATGCAATGATTGATGAGGTACGAAAAGGGTGTAGAATTGATGGTAGCTGGACCACTCAGGGATACACTAACATAGTTATGGCTTTAAATGAGGTTGGCTTATCGGGTATTAAGAAAAATCATGTCAAGAACCGCCAGAAAAGCCTCAAGGACAGGTGGAGGGAAGTCCATGATTTGTTTGGTGGATTGAGTGGTTTCGCATGGAACCAGACCACCAAACATTTTGAAGCCGAGGACGAAGTTTGGAGTGAGTTGATTAAGGCCAAACCATCTGCGGCGAAATGGCGTGTGAATCCCATTCGCCATTATGACCTCATGGAGGAGTTGTGGTCTAATGATAGAGCCACGGGAAGTCGGGTCAGGACCGCCCGTGACATCAATTCACCTCCTGACATGAGCAATTTCAGTAAACGTAACAGAACCCATAAGGTTAAATCTCCAGCAGAAGATGTTGACGTTCCTCCTCAGCCAACAACGAGAATTGAACAAGTTCTTGATTATTCAAGATACTTTAGTACCAAACGTCAAATGGTGGTGTTTGAAAAGAAGTTTCATGCAAGACCAGTATTACCACGAAAAGTTATGCATACTCCATTTTTTGCTACTCTAGGATTTGAATTCCAAAATCTTCTGAATTGGCAAGGTTTACAACCTTTCCTTGAAATTAATCTTCCGTATTATGAGGACTTGGTAAGAGTATTTTATACAAATGTAAAAATCACACCTGTTGGTCACCTTGCCATTGAGATTTGCGAAAAGATGATACACATTAAAGAAATGGATTGGATGATCATTGCTCATCTACAGTATGACGGTCTTAAGTTAACCCCTGGGACGATCCCTGAGGAACTGAATTTTGATCGAGCACTAGCATTATTGTCCATGATTCGTGAAGATGTTGAAGGTGAAAATCTCAAAAATATGTCTCTCCCATATGCAAATTTGATAACGAGGATCTTGCAGGTGTATGGCTTCGACTTGTCGAATGAACAAGCAATAATGTTAGGCTGGAATCATTACTTTGGGAAAAAAAGTATGACAAAATTAAATATATTCCATGTCAATGGCATATGGCAACTTGGTAGGCCTCACCATGCACACGAAGAAGATGATGAAGAGGATGAATTGCCAGCACAACATGTTGAAGGTGGTCAACCTAAGGCGGCAATCCCCAATCAAACCGAATTGTTAACTCAAATTTTGTCCGGCATACAAAACATGAATACCCGCATTGACAGGGTTGATCAAAGGATGGACCGAATTGAGGATACTCTGAATGACATTCGACGTCATCAAGGCCATTGA 1395 0.4129 MDRGKNVASNSSGSYREFMKWTAEMNLILLNAMIDEVRKGCRIDGSWTTQGYTNIVMALNEVGLSGIKKNHVKNRQKSLKDRWREVHDLFGGLSGFAWNQTTKHFEAEDEVWSELIKAKPSAAKWRVNPIRHYDLMEELWSNDRATGSRVRTARDINSPPDMSNFSKRNRTHKVKSPAEDVDVPPQPTTRIEQVLDYSRYFSTKRQMVVFEKKFHARPVLPRKVMHTPFFATLGFEFQNLLNWQGLQPFLEINLPYYEDLVRVFYTNVKITPVGHLAIEICEKMIHIKEMDWMIIAHLQYDGLKLTPGTIPEELNFDRALALLSMIREDVEGENLKNMSLPYANLITRILQVYGFDLSNEQAIMLGWNHYFGKKSMTKLNIFHVNGIWQLGRPHHAHEEDDEEDELPAQHVEGGQPKAAIPNQTELLTQILSGIQNMNTRIDRVDQRMDRIEDTLNDIRRHQGH* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1539 464 Coils Coil 434 461 - -
Pvu11g1539 464 MobiDBLite consensus disorder prediction 153 185 - -
Pvu11g1539 464 PANTHER EXPRESSED PROTEIN 9 263 - -
Pvu11g1539 464 Pfam Myb/SANT-like DNA-binding domain 20 114 IPR024752 -
Pvu11g1539 464 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 9 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1539 Pvu-Chr11 38645005 38647505 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1539 - - pvu:PHAVU_011G148300g 944.495