Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1514 ATGAGGGTTATTGTTTTTTCTCTAACTCTTTTCCTCACAACAGTCCAACTCCTTGTGAAAGCAGAATCAATAAGCAGAGCAGATTTTCCAAAGGGGTTTATTTTTGGAACTGCTTCTTCAGCTCACCAGTTTGAGGGAGCTGCTGATGAAGGAAACAAAGGAGATAGCATATGGGATACTTTCTCAAGGATTCCAGGGAGAATTGTGGATTTCAGTAATGCAGACATGGCAGTCGATCAATACCACAGATTTCAGAATGATGTAAACTTGATGAAGGATTTGGGAATGGATTCTTACAGATTTTCCATATCGTGGACGAGAATTTTCCCAAATGGAACAGGGGAACCCAATAAAGAGGGAATAACATATTACAACAGCCTCATTGATGCTTTGCTTGAAAAAGGAATCCAGCCTTTTGTTACACTATATCATTGGGATCTTCCACAAATGCTTGAAGATGAATATGAAGGATGGTTAAGCACACAAATCATAAAAGATTTTGAGCATTATGCATATACATGCTTCAAAGCTTTTGGAGACAGAGTTAAGCACTGGATTACCTTCAATGAGCCTCATAACTTTGCACTCCATGGTTATGATTTAGGGATTCAAGCACCAGGAAGATGTTCCCTGTTAGGTCGTCTTCTATGCAAGAAGGGAAAATCATCCACTGAGCCATACATTGTTGCTCATAACATTCTCTTATCTCATGCTGCTGCATACAGAAGCTACCAACTACATTTCAAGGAACAAGGTGGTCAAATAGGAATAGCACTAGATGTTATTTGGTATGAACCAATAACAGAACTTGATGAAGACAAAGATGCAGCATTAAGAGCTATGGACTTCTCACTTGGATGGTTCCTAGATCCACTTTTCTTTGGAAAATACCCTCTCTCAATGAAGAAACTTGTAGGTGAGAGATTACCAGAGATTTCTTATGCAAACTCAAAGTTTCTTGTGGGATCTTTGGATTTTATTGGCATAAATCATTACACCTCAGTATATACTCGTAACGATAGGACTAGGATTCATAAACTGGTTATGCAAGATGCTGTTTCTGATGCTGCTGTTATTACAACAGCATACCGAAGAGGAGCTGCAATTGGAGAAAAGGCAGCTTCAAGTTGGTTGCACATTGTCCCTTGGGGTATCCGAAAGTTGGTAAAACATGTGAAAGACAAATATGGGGACACACCAGTAATTATAACAGAGAATGGAATGGATGACCCAAGCCAACCCTTTATGACCTTACAGAAGGCCTTAAAAGATGACAAGAGGATAAGATACCATGGAGACTATCTCTCAAACCTATCTGCTGCTATAAGGGAAGATGATTGCAATGTACGAGGTTACTTTGTATGGTCATTGCTTGACAACTGGGAGTGGAACATGGGATACACTGTACGGTTTGGACTCTACTATGTGGATTTCAAGAATAATCTTACTAGGATACCAAAAGATTCTGTGAAATGGTTCAAAAACATACTCAGAATAGAGACAGAAAGGAGTAGTGAAATTTGA 1524 0.3917 MRVIVFSLTLFLTTVQLLVKAESISRADFPKGFIFGTASSAHQFEGAADEGNKGDSIWDTFSRIPGRIVDFSNADMAVDQYHRFQNDVNLMKDLGMDSYRFSISWTRIFPNGTGEPNKEGITYYNSLIDALLEKGIQPFVTLYHWDLPQMLEDEYEGWLSTQIIKDFEHYAYTCFKAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGRLLCKKGKSSTEPYIVAHNILLSHAAAYRSYQLHFKEQGGQIGIALDVIWYEPITELDEDKDAALRAMDFSLGWFLDPLFFGKYPLSMKKLVGERLPEISYANSKFLVGSLDFIGINHYTSVYTRNDRTRIHKLVMQDAVSDAAVITTAYRRGAAIGEKAASSWLHIVPWGIRKLVKHVKDKYGDTPVIITENGMDDPSQPFMTLQKALKDDKRIRYHGDYLSNLSAAIREDDCNVRGYFVWSLLDNWEWNMGYTVRFGLYYVDFKNNLTRIPKDSVKWFKNILRIETERSSEI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1514 507 Gene3D Glycosidases 15 499 - -
Pvu11g1514 507 PANTHER GLYCOSYL HYDROLASE 14 498 IPR001360 GO:0004553|GO:0005975
Pvu11g1514 507 PANTHER BETA-GLUCOSIDASE 41-RELATED 14 498 - -
Pvu11g1514 507 SUPERFAMILY (Trans)glycosidases 22 497 IPR017853 -
Pvu11g1514 507 Pfam Glycosyl hydrolase family 1 27 498 IPR001360 GO:0004553|GO:0005975
Pvu11g1514 507 PRINTS Glycosyl hydrolase family 1 signature 323 337 IPR001360 GO:0004553|GO:0005975
Pvu11g1514 507 PRINTS Glycosyl hydrolase family 1 signature 401 409 IPR001360 GO:0004553|GO:0005975
Pvu11g1514 507 PRINTS Glycosyl hydrolase family 1 signature 424 435 IPR001360 GO:0004553|GO:0005975
Pvu11g1514 507 PRINTS Glycosyl hydrolase family 1 signature 446 463 IPR001360 GO:0004553|GO:0005975
Pvu11g1514 507 PRINTS Glycosyl hydrolase family 1 signature 470 482 IPR001360 GO:0004553|GO:0005975
Pvu11g1514 507 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 33 47 IPR033132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1514 Pvu-Chr11 37609015 37614142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1514 19 443 Glycoside Hydrolase AT5G54570 72.365 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1514 K01188 - gmx:100783543 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1514 11 37609015 37614142 Pvu11g1514 11 37609015 37614142 ECH