Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1497 ATGATGGATTTTCATGGTGGAGAGGAGATAAGTATGAAGAATTATGATTTGGAAAATAACTACAAGGAAGGAGAAAACAGAAAAGAAAGCTCAGAAGACAGTGATGAAGTTCTGGCTCATGGTTGGCGTTTGTTGCCAAAGAGAACATACGATGCAATAAAACAAAATAAGGCTGAATCATGGAGAGAAATAGATGATCAGAGTTTAAAGCAAGAGAGCCCTAAGGGAAACACGGTGCTGCATGTAGCAGCTCTCTATGGAAATGATAGCTGTGTGGAAAGAATACTTGAAATTTGTCCAGCAGAGCTTTTGAGAGCAAAAAATAGAAATGGTGACACCCCACTGCATGTTGCTGCAAGAGCTGGCAAGATCCCTTCTCTTCACCAGTTGGTGGCTACACTTCTTCGTTATCCAATTACTAAAAAAGCCACATGGGCAATCCCTGAAACCAACAACCTAGGAAACACTTTGTTTCATGAGGCCTTGTTGAATGGTCACAAAGATGTAATGGTGATTCTAGATTCTACACCAACCTTCAGGAACTGGGCTGTGAAAAATGTATTTATTATAAGAAACAGACAAGGCAAATCAGTTTTGCACTTAGCATTTGAGAAAGGCTACGAGGACATTGTTGATGATTTATTGACCAGAGTAGTTCCAACTCTAGAGTCTCTGTAA 678 0.3997 MMDFHGGEEISMKNYDLENNYKEGENRKESSEDSDEVLAHGWRLLPKRTYDAIKQNKAESWREIDDQSLKQESPKGNTVLHVAALYGNDSCVERILEICPAELLRAKNRNGDTPLHVAARAGKIPSLHQLVATLLRYPITKKATWAIPETNNLGNTLFHEALLNGHKDVMVILDSTPTFRNWAVKNVFIIRNRQGKSVLHLAFEKGYEDIVDDLLTRVVPTLESL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1497 225 ProSiteProfiles Ankyrin repeat region circular profile. 110 136 - -
Pvu11g1497 225 SMART ANK_2a 194 224 IPR002110 GO:0005515
Pvu11g1497 225 SMART ANK_2a 75 105 IPR002110 GO:0005515
Pvu11g1497 225 SMART ANK_2a 110 141 IPR002110 GO:0005515
Pvu11g1497 225 SMART ANK_2a 153 182 IPR002110 GO:0005515
Pvu11g1497 225 Pfam Ankyrin repeats (3 copies) 80 173 IPR002110 GO:0005515
Pvu11g1497 225 MobiDBLite consensus disorder prediction 15 35 - -
Pvu11g1497 225 PANTHER MOLTING PROTEIN MLT-4 71 170 - -
Pvu11g1497 225 PANTHER MOLTING PROTEIN MLT-4 75 216 - -
Pvu11g1497 225 SUPERFAMILY Ankyrin repeat 69 215 IPR036770 -
Pvu11g1497 225 Gene3D - 8 220 IPR036770 -
Pvu11g1497 225 ProSiteProfiles Ankyrin repeat profile. 110 136 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1497 Pvu-Chr11 36899245 36900770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1497 56 215 Miscellaneous Gene Families AT1G05640 29.814 1.07e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1497 - - pvu:PHAVU_005G046700g 340.502