Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1490 ATGGCTAGCGGAAGCTTATCACTTCCAACTTCTGCCAATGGTGCAAAACCTCCCATCACTCGACCCACTGCAGATTTTCATCCTTCTGTTTGGGGCGATCGCTTCCTTTCCTACGTTCCTACTTCTGCTGAAAGTGATAACCACATTCAACAAGCTAAACTATTAAAAGAGGACGTGAGGAAGACTCTTGTCTCACCTATTGATCATAACAATTTCTCTTTTAAATTGAACTTCATTGATTATGTCCAACATTTGGGTGTCTCTTACCATTTTGAGCACGAAATTGACAATCTTCTTTGTCAAATTTATGACATTTCAACAAAGGACAATAATATCATAGCTCATAGTGATAATCTTTACCATACAGCTCTACTCTTTAGGTTGCTCAGACAGCATGGATACCGCATTTCTTCAAGTATATTTTGTAAATTCCAAGACCAAACCGGAAAGTTTAAGGAAAGTTTAGATGATGATATTCAAGGAATGTTAAGCTTGTATGAAGCAGCAGGACTAAGATGTCATGGAGAAGATATGCTTGAAGAAGCACATAAGTTCAGTTTCGAGCAGTTAACAAACTTAAAACAATCACTTTGCAGAGGTTTGCCTAGGTTGGAGGCAACATATTATATGTCTTACTACGAAGAAGATCCATCTCATGATGAAAAATTGTTAACATTTGCAAAATTAGATTTTAATATGTTGCAGAAGCTACATTTGAAAGAAGTCAGCAGTCTAACCAGATGGTGGACTAAAGATTTAAATGTCTCAACCAATTTACCTTTTACACGAGATAGGATCGTAGAATGTTGTTTTTGGATTTTGGGGGTCTACTTTGAACCACAATATTATAGATGGATAACAACAAAAGCAATAGTTCTAGCCTCCATCATTGATGACCTCTATGATGCATATGGAACCATTGAAGAACTTGAGCTTTTCACCAGTGCAATTGAGAGGTGGGATATTTGTTGCTTGGTTGATCTCCCAAAATACATGCAATTATGTTATAAGGCAATTTTGGATGTTTATGAAGAAATTGAGAAAGCGATGAGAAAGCAAGGAAAAGTATATTTTATGAAGTATGCCAAGAAAGAGATAAAAAGACTAGTCCAGGCTCACATGGCTGAGGGAAGATGGTGCCATACTAACCACATTCCAACAATGGAGGAGTACATGGAAGTAAGAGAAATATCAAGTGGTTACCCTTTCTTGATTACTTTATCTTTCCTGGGCATGAAAGATACAACAGAGGAGGTTCTTATATGGGCAACAAATGAACCAATAATTATTGCAGCTTCTACAACTATATGTAGAATCATGGATGACATTGTCGGAGATGAGTTTGAACAACAGATAGAACATGTTGTTTCAAGCATTTACTGCTATATGAAGCAGCATAAAGTGTCAAGGAAATGTGCCATTGAAGAACTACAAAAGTTAGTTGAGAATGCTAGGAAGGACATAAATGATGCATGCTTAGCTCCTACTCAAGTACCAATGACTTTTCTTATGCGTGTAGTCAACTTTGCACGTGTGATCGATATGCATTACAAAGATGAAGATAACTATACAAATGCAGGAGGAATAATGAAAAATCACATTGAATCTTTATTAGTTAAAAAGATGTTCGTGTAA 1635 0.3645 MASGSLSLPTSANGAKPPITRPTADFHPSVWGDRFLSYVPTSAESDNHIQQAKLLKEDVRKTLVSPIDHNNFSFKLNFIDYVQHLGVSYHFEHEIDNLLCQIYDISTKDNNIIAHSDNLYHTALLFRLLRQHGYRISSSIFCKFQDQTGKFKESLDDDIQGMLSLYEAAGLRCHGEDMLEEAHKFSFEQLTNLKQSLCRGLPRLEATYYMSYYEEDPSHDEKLLTFAKLDFNMLQKLHLKEVSSLTRWWTKDLNVSTNLPFTRDRIVECCFWILGVYFEPQYYRWITTKAIVLASIIDDLYDAYGTIEELELFTSAIERWDICCLVDLPKYMQLCYKAILDVYEEIEKAMRKQGKVYFMKYAKKEIKRLVQAHMAEGRWCHTNHIPTMEEYMEVREISSGYPFLITLSFLGMKDTTEEVLIWATNEPIIIAASTTICRIMDDIVGDEFEQQIEHVVSSIYCYMKQHKVSRKCAIEELQKLVENARKDINDACLAPTQVPMTFLMRVVNFARVIDMHYKDEDNYTNAGGIMKNHIESLLVKKMFV* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1490 544 CDD Terpene_cyclase_plant_C1 21 539 IPR044814 GO:0010333|GO:0016102
Pvu11g1490 544 PANTHER OS04G0344100 PROTEIN-RELATED 7 525 - -
Pvu11g1490 544 MobiDBLite consensus disorder prediction 1 25 - -
Pvu11g1490 544 SUPERFAMILY Terpenoid synthases 219 541 IPR008949 -
Pvu11g1490 544 PANTHER TERPENE SYNTHASE 2-RELATED 7 525 - -
Pvu11g1490 544 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 219 IPR008930 -
Pvu11g1490 544 Gene3D Farnesyl Diphosphate Synthase 28 532 IPR008949 -
Pvu11g1490 544 Gene3D - 70 219 IPR036965 GO:0010333|GO:0016829
Pvu11g1490 544 SFLD Isoprenoid Synthase Type I 220 542 - -
Pvu11g1490 544 Pfam Terpene synthase, N-terminal domain 31 195 IPR001906 GO:0010333|GO:0016829
Pvu11g1490 544 Pfam Terpene synthase family, metal binding domain 224 487 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu11g1490 544 Coils Coil 474 494 - -
Pvu11g1490 544 MobiDBLite consensus disorder prediction 1 17 - -
Pvu11g1490 544 SFLD Terpene Cyclase Like 1 C Terminal Domain 220 542 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1490 Pvu-Chr11 35642400 35649458 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1490 K15803 - gmx:100802427 763.837