Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1489 ATGGCTAGCGGAAGCTTATCACTTCCAACTTCTGCCAATGGTGCAAAACCTCCCATCACTCGACCCACTGCAGATTTTCATCCTTCCCTTTGGGGCGATCGCTTCCTTTCCTACGTTCCTACTTTCGCTGAAAGTGATAGCCACATTCAACAAGCTAAACTATTAAAAGAGGACGTGAGGAAGACTCTTGTTTCACCTATTGATCATAACAATTTCTCTTTTAAATTGAACTTCATCGATTTAGTCCAACGTTTGGGTGTCTCTTACCATTTTGAGCACGAAATTGGCACTCTTCTATGTCAAATTTATGACATTTCAACAAAGGACAATAATATCATAGCTCATAGTGATCATCTTTACCAAACGGCTCTACTCTTTAGGTTGCTCAGACAACATGGATACCGCATTTCTTCAAACAACACCTTTTGTAAATATGTACATATGGACTACCAAAGATCACAACTTATAAACTATTTATATTTAAGTCACAATTATAAGACCAAATCGGAAAGTTTAGCTGATGATATTCAAGGAATCTTAAGCTTGTATGAAGCAGCAGGACTAAGATGTCATGGAGAAGATATGCTTGAAGAAGCACATAAGTTCAGTTTCGAGCAGTTAACAAAGTTTATAACCACCAAATTAAGTTGTTCTCATGCGGCACGAGTGCAACATAGCTTAAAACAATCACTTCATAGAGGTTTGCCCAGGTTGGAGGCGACATATTATATGTCTTTCTACGAAGAGGATCCATCTCATGATGAAAAATTGTTAACATTTGCAAAATTAGATTTTAATATGTTGCAGGAGCTACATTTGAAAGAAGTCAGCAGTCTAACCAAATGGTGGACTAAGGATTTAAATGTCTCAACCAATTTACCGTTTACACGAGATAGGATCATAGAATGTTGTTTTTGGATTTTGGGGGTCTACTTTGAACCACAATATTATAGATGGATAACAACAAAAGCAATAGCTCTAGCTTCCATCATTGATGACCTCTATGATGCTTATGGAACCATTGAAGAACTTGAGCTTTTCACTAGTGCAATTGAGAGGTGGGATATTTGTTGCTTGGTTGATCTCCCAAAATACATGCAATTATGTTATAAGGCAATTTTGGATGCTTATGAAGAAATTGAGAAAGAGATGAGAAAGCAAGGAAAAATATATTTCATGAAGTATGCCAAGAAAGAGATGAAAAGACTAGTCCAAGCTCACATGGCTGAGGCAAGATGGTGTCATACCAACCACATTCCAACAATGGAGGAGTACATAGAAGTAAGAGGAATGTCAACTGGTTACCCTTTCTTGATTACCTTATCTTTCTTAGGCATGGAAGATACAACAGAGGAGGTCCTTATATGGGCAACGAATGAACCAATAATTATTGCAGCTTCTATAGCTATATGCAGAATCATGGATGACATTGTTGGAAATGAGTTTGAACAACAGAGAGAACATGTTGTTTCAAGCATTTGCTGTTATATGAAGCAGCATAAAGTGTCAAAGAAATGTGCCATTGAAGAACTACAAAAGTTAGTTGAGAATGCTTGGAAGGACATAAATGATGCATGCTTAGCTCCTACTCAAGTACCAATTATGCGTGTAGTCAACTTTGCACGTGTGATCGATATGCATTACAAAGACAAAGATAACTATACAAATGCAGAAGGAATAATGAAAGATCATATTCAATCTTTATTAGTTAAAAAGATGTTCGTATAA 1728 0.3675 MASGSLSLPTSANGAKPPITRPTADFHPSLWGDRFLSYVPTFAESDSHIQQAKLLKEDVRKTLVSPIDHNNFSFKLNFIDLVQRLGVSYHFEHEIGTLLCQIYDISTKDNNIIAHSDHLYQTALLFRLLRQHGYRISSNNTFCKYVHMDYQRSQLINYLYLSHNYKTKSESLADDIQGILSLYEAAGLRCHGEDMLEEAHKFSFEQLTKFITTKLSCSHAARVQHSLKQSLHRGLPRLEATYYMSFYEEDPSHDEKLLTFAKLDFNMLQELHLKEVSSLTKWWTKDLNVSTNLPFTRDRIIECCFWILGVYFEPQYYRWITTKAIALASIIDDLYDAYGTIEELELFTSAIERWDICCLVDLPKYMQLCYKAILDAYEEIEKEMRKQGKIYFMKYAKKEMKRLVQAHMAEARWCHTNHIPTMEEYIEVRGMSTGYPFLITLSFLGMEDTTEEVLIWATNEPIIIAASIAICRIMDDIVGNEFEQQREHVVSSICCYMKQHKVSKKCAIEELQKLVENAWKDINDACLAPTQVPIMRVVNFARVIDMHYKDKDNYTNAEGIMKDHIQSLLVKKMFV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1489 575 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 253 IPR008930 -
Pvu11g1489 575 PANTHER TERPENE SYNTHASE 2-RELATED 7 555 - -
Pvu11g1489 575 Gene3D - 70 253 IPR036965 GO:0010333|GO:0016829
Pvu11g1489 575 SFLD Isoprenoid Synthase Type I 254 573 - -
Pvu11g1489 575 SUPERFAMILY Terpenoid synthases 253 570 IPR008949 -
Pvu11g1489 575 CDD Terpene_cyclase_plant_C1 21 570 IPR044814 GO:0010333|GO:0016102
Pvu11g1489 575 Pfam Terpene synthase family, metal binding domain 258 521 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu11g1489 575 PANTHER OS04G0344100 PROTEIN-RELATED 7 555 - -
Pvu11g1489 575 MobiDBLite consensus disorder prediction 1 21 - -
Pvu11g1489 575 Gene3D Farnesyl Diphosphate Synthase 28 563 IPR008949 -
Pvu11g1489 575 SFLD Terpene Cyclase Like 1 C Terminal Domain 254 573 IPR034741 -
Pvu11g1489 575 Pfam Terpene synthase, N-terminal domain 31 227 IPR001906 GO:0010333|GO:0016829
Pvu11g1489 575 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1489 Pvu-Chr11 35468495 35473572 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1489 K15803 - gmx:100802427 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1489 11 35468495 35473572 Pvu11g1489 11 35468495 35473572 ECH