Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1486 ATGCAACAAACCATGTCTAACGGAAGCTTATCACTTCCAACTTCTGCCAATGGTGCAAAATCTCCTTTCACTCGACCCATTGCAAATTTTCATCCTTCTATTTGGGGCGATCGCTTCCTTTCCTACGTTCCTACTTTCGCTGAAAGTGATAGCCACATTCAACAAGCTAAACTATTAAAAGAGGACGTGATGAAGATCCTTGTCTCACTTATTGATCATAACAATTTCTCTTTTAAATTGAACTTCATTGATTATGTCCAACGTTTGGGTGTCTCTTACCATTTTGAGCACGAAATTGACACTCTTCTTTGTCAAATTTATGACATTTCAACAAAGGACAATAATATCATAGCTCATAGTGATAATCTTTACCATACGGCTCTACTCTTTAGGTTGCTCAGACAGCATGGATACCGCATTTCTTCAAGTATATTTTGTAAATTCCAAGACCAAACCGGAAAGTTTAAGGAAAGTTTAGATGATGATATTCAAGGAATGTTAAGCTTGTATGAAGCAGCAGGACTAAGATGTCATGGAGAAGATATGCTTGAAGAAGCACATAAGTTCAGTTTCGAGCAGTTAACGAAGTTTATAACCACCCAATTAAGTTGTTCTCATGTGGCACGAGTGCAACATAGCTTAAAACAATCACTTCGAAGAGGTTTGCCTAGATTGGAGGCAACATATTATATGTCTTACTACGAAGAAGATCCATCTCATGATGAAAAATTGTTAACATTTGCAAAATTAGATTTTAATATGTTGCAGAAGCTACATTTGAAAGAAGTCAGCAGTCTAACCAGATGGTGGACTAAAGATTTAAATGTATCAACCAATTTACCTTTTACACGAGATAGGATCGTAGAATGTTGTTTTTGGATTTTGGGGGTCTACTTTGAACCACAATATTATAGATGGATAACAACAAAAGCAATAGCTCTAGCCTCCATCATTGATGACCTCTATGATGCTTATGGAACCATTGAAGAACTTGAGCTTTTCACCAGTGCAATTGAGAGGTGGGATATTTGTTGCTTGGTTGATCTGCCAAAATACATGCAATTATGTTATAAGGCAATTTTGGATGTTTATGAAGAAATTGAGAAAGAGATGAGAAAGCAAGGAAAAGTATATTTTATGAAGTATGCCAAGAAAGAGATGAAAAGACTAGTCCAGGCTCACATGGCTGAGGGAAGATGGTGTCATACCAACCACATTCCAACAATGGAGGAGTACATGAAAGTAAGAGAAATATCAAGTGGTTACCCTTTCTTAATTACTTTATCTTTCCTGGGCATGAAAGATACAACAGAGGAGGTTCTCATATGGGCAACAAATGAACCAATAATTATTGCAGCTTCTACAACTATATGTAGAATCATGGATGACATTGTCGGAGATGAGTTTGAACAACAGAGAGAACATGTTGTTTCAAGCATTTCCTGCTATATGAAGCAGCATAAAGTGTCAAGGAAATGTGCCATTGAAGAACTACAAAAGTTAGTTGAGAATGCTTGGAAGGACATAAATGATGCATGCTTAGCTCCTACTCAAGTACCAATGACTTTTCTTATGCGTGTAGTCAACTTTGCACGTGTGATCGATATGCATTACAAAGATGAAGATAACTATACAAATGCAGGAGGAATAATGAAAAATCACATTGAATCTTTATTAGTTAAAAAGATGTTCGTGTAA 1698 0.364 MQQTMSNGSLSLPTSANGAKSPFTRPIANFHPSIWGDRFLSYVPTFAESDSHIQQAKLLKEDVMKILVSLIDHNNFSFKLNFIDYVQRLGVSYHFEHEIDTLLCQIYDISTKDNNIIAHSDNLYHTALLFRLLRQHGYRISSSIFCKFQDQTGKFKESLDDDIQGMLSLYEAAGLRCHGEDMLEEAHKFSFEQLTKFITTQLSCSHVARVQHSLKQSLRRGLPRLEATYYMSYYEEDPSHDEKLLTFAKLDFNMLQKLHLKEVSSLTRWWTKDLNVSTNLPFTRDRIVECCFWILGVYFEPQYYRWITTKAIALASIIDDLYDAYGTIEELELFTSAIERWDICCLVDLPKYMQLCYKAILDVYEEIEKEMRKQGKVYFMKYAKKEMKRLVQAHMAEGRWCHTNHIPTMEEYMKVREISSGYPFLITLSFLGMKDTTEEVLIWATNEPIIIAASTTICRIMDDIVGDEFEQQREHVVSSISCYMKQHKVSRKCAIEELQKLVENAWKDINDACLAPTQVPMTFLMRVVNFARVIDMHYKDEDNYTNAGGIMKNHIESLLVKKMFV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1486 565 Pfam Terpene synthase family, metal binding domain 245 508 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu11g1486 565 Gene3D - 74 240 IPR036965 GO:0010333|GO:0016829
Pvu11g1486 565 CDD Terpene_cyclase_plant_C1 25 560 IPR044814 GO:0010333|GO:0016102
Pvu11g1486 565 SUPERFAMILY Terpenoid synthases 240 560 IPR008949 -
Pvu11g1486 565 SFLD Isoprenoid Synthase Type I 241 563 - -
Pvu11g1486 565 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 31 240 IPR008930 -
Pvu11g1486 565 Gene3D Farnesyl Diphosphate Synthase 32 553 IPR008949 -
Pvu11g1486 565 SFLD Terpene Cyclase Like 1 C Terminal Domain 241 563 IPR034741 -
Pvu11g1486 565 Pfam Terpene synthase, N-terminal domain 34 214 IPR001906 GO:0010333|GO:0016829
Pvu11g1486 565 PANTHER OS04G0344100 PROTEIN-RELATED 11 546 - -
Pvu11g1486 565 PANTHER TERPENE SYNTHASE 2-RELATED 11 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1486 Pvu-Chr11 35148747 35153770 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1486 K15803 - gmx:100802427 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1486 11 35148747 35153770 Pvu11g1486 11 35148747 35153770 ECH