LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g1484	ATGCAACAAACCATGTCTAACGGAAGCTTATCACTTCCAACTTCTGTCAATGGTGCAAAACCTCCCTTCACTCGACCCACTGCAAATTTTCCTCCTTCAGTTTGGGGTGATCGCTTCCTTTCCTACGTTCCTACTAATGCTGAAACTGATAGCCACATTCAACAAGCTAAACTATTGAAAGAGGACGTGAGGAAGAGCCTTGTCTCACCTATTGATCATACCAATTTCTCTTTTAAATTGAACTTCATTGATTCAGTCCAACGTTTGGGTGTCTCTTACCATTTTGAGTACGAAATTGACAGTGTTCTATGTCAAATTTATGACATTTCAACAAAGGACAATAATATCATAGCTCATAGTGATCATCTTTACCATACGGCACTACTCTTTAGGTTGCTTAGACAACATGGATACCGCATTTCTTCAAGTATATTTTGCAAATTTCAAGATCAAACTGGAAAGTTTAAGGAAAGTTTAGCTAATGATATTGAAGGAATGTTAAGCTTATTTGAAGCTGCAGGACTAAGATGTCATGGAGAAGATATGCTAGAAGAAGCACATAAGTTCAGTTTCGAGCAGTTAATGAAGTTTATAACCACCCAATTAAATTGTTCTCATGGGGTACGAGTGCAACATAGCTTAAAACAATCACTTCGCAGAGGTTTACCTAGGTTGGAGGCGACATATTATATGTCTTTCTACGAAGAAGATCCATCTCATGATGAAAAATTGTTAGCATTTGCAAAATTAGATTTTAATATGCTGCAAGAGCTACATTTGAAAGAAGTCAGCAGTATAACCAAATGGTGGACTAAGGATTTAAATGTCTCCACCAATTTACCTTTTACTCGAGATAGGATCGTAGAATGTTGTTTTTGGATTTTGGGGGTTTACTTTGAGCCACAATATTCTAGATGGATAACAACAAAAGTAATAGCTCTAGCTTCCACCATTGATGACCTCTATGATGCTTATGGAACCATTGATGAACTTGAGCTTTTCACAAGTGCAATTGAGAGGTGGGATATTTGTTGCTTGGTTGCTCTCCCAAAATACATGCAATTATGTTATAGGACAATTTTGGATGTTTATGAAGAAATTGAGCAAGAGATGAGAAAGCAAGGAAAAGTATATTTCATGAAGTATGCCAAAAAAGAGATGAAAAGACTAGTCCAAGCTCACATGGCTGAGGCAAGATGGTGTCATACCAACCACATTCCAACAATGGAGGAGTACATGGAAGTAAGAGGAATGTCAAGTGGTTACCCTTTATTGATTACCTTATCTTTCCTAGGCATGGAAGATACAACAGAGGAGGTCCTTATATGGGCAATGAATGAACCAGTAATTATTGCAGCTTCTACAGCTATATCTAGAATCATGGATGACATTGTTGGATACGAGTTTGAACAGCAGAGAGAACATGTTGTTTCAAGCATTTACTGCTATATGAAGCAGCATAAAGTGTCAAGGGAATGTGCCATTGAAGAACTACAAAAGTTAGTTGAGAATGCTTGGAAGGACATAAATGATGCATGCTTAGCTCCTACTCAAGTACCGATGACTTTTCTTATGCGTGCACTCAACTTTGCTCGTGTGATCGACGTGCTTTACAAAGATGAAGATAACTATACAAATGCAGGAGGGATAATGAAAGTTCATATTGAATCTTTGTTAGTTAAAAAGATGTCCCTATAA	1698	0.3746	MQQTMSNGSLSLPTSVNGAKPPFTRPTANFPPSVWGDRFLSYVPTNAETDSHIQQAKLLKEDVRKSLVSPIDHTNFSFKLNFIDSVQRLGVSYHFEYEIDSVLCQIYDISTKDNNIIAHSDHLYHTALLFRLLRQHGYRISSSIFCKFQDQTGKFKESLANDIEGMLSLFEAAGLRCHGEDMLEEAHKFSFEQLMKFITTQLNCSHGVRVQHSLKQSLRRGLPRLEATYYMSFYEEDPSHDEKLLAFAKLDFNMLQELHLKEVSSITKWWTKDLNVSTNLPFTRDRIVECCFWILGVYFEPQYSRWITTKVIALASTIDDLYDAYGTIDELELFTSAIERWDICCLVALPKYMQLCYRTILDVYEEIEQEMRKQGKVYFMKYAKKEMKRLVQAHMAEARWCHTNHIPTMEEYMEVRGMSSGYPLLITLSFLGMEDTTEEVLIWAMNEPVIIAASTAISRIMDDIVGYEFEQQREHVVSSIYCYMKQHKVSRECAIEELQKLVENAWKDINDACLAPTQVPMTFLMRALNFARVIDVLYKDEDNYTNAGGIMKVHIESLLVKKMSL*	566

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g1484	565	Gene3D	Farnesyl Diphosphate Synthase	32	552	IPR008949	-
	Pvu11g1484	565	CDD	Terpene_cyclase_plant_C1	25	560	IPR044814	GO:0010333\|GO:0016102
	Pvu11g1484	565	Pfam	Terpene synthase, N-terminal domain	35	204	IPR001906	GO:0010333\|GO:0016829
	Pvu11g1484	565	Coils	Coil	484	504	-	-
	Pvu11g1484	565	Gene3D	-	74	240	IPR036965	GO:0010333\|GO:0016829
	Pvu11g1484	565	SFLD	Isoprenoid Synthase Type I	241	564	-	-
	Pvu11g1484	565	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	31	240	IPR008930	-
	Pvu11g1484	565	SFLD	Terpene Cyclase Like 1 C Terminal Domain	241	564	IPR034741	-
	Pvu11g1484	565	MobiDBLite	consensus disorder prediction	1	23	-	-
	Pvu11g1484	565	PANTHER	OS04G0344100 PROTEIN-RELATED	14	545	-	-
	Pvu11g1484	565	Pfam	Terpene synthase family, metal binding domain	245	508	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Pvu11g1484	565	SUPERFAMILY	Terpenoid synthases	240	563	IPR008949	-
	Pvu11g1484	565	MobiDBLite	consensus disorder prediction	1	22	-	-
	Pvu11g1484	565	PANTHER	TERPENE SYNTHASE 2-RELATED	14	545	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu11g1484	Pvu-Chr11	34737999	34743300	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu11g1484	K15803		-	gmx:100802427	805.053

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu11g1484	11	34737999	34743300	Pvu11g1484	11	34737999	34743300	ECH