Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1483 ATGTTGAGCATGCTACAGTTGTTAAGGGCTATTCCAACATTGCTCATTCTCTGTTTCTTCCTTATTTTTGGGAATTTCCACAATGCAGAGGCCAGAAATAGACATTACAAATGGGAGGTGAAGAATGAGTATAGGTCCCCTGATTGCTTTAAGAAGCTTGTTATCACAATCAATGGAATAACTCCAGGACCCACCATCCAGGCTCAGGAGGGTGACACGGTTGTTGTTCAACTTAACAACACTTTGATGACGGAAAACCTTTCCATTCACTGGCATGAGATTAGACAAACAAGCATTATTCTGAACGATTGGTACCACAAGAGCACTTATGAACAAGCTGCTGAACTATCTTCAATTGCCTTTCAATGGGTGGGAGAGCCTCAGTTTACCAAGATAATCAGGTTATCAATTTATTCTGTAAACCACCTACAGAATCAGGTTAAGCTTTTCATGTTATCAAACCTGAGTTGGAATCTCTATTCGACAGCAGCCCTGATGAGTTTAATAGATAGCTTTAAAGATGTGTTTAAACTCTACGTAGGTGGGATCAAGGTGTCTGAAGGTATACTTAAGAATGTTAGGGATAAAATCCCTGCAGAGCTGCTCAAAGAACTTCTCCGAACTGATGGAGAAAGGTTCCTCAAGTTTCCCGTGCCTCAGGTGATTAAAGAAGTAGTGGGGGTTTCAAAACCGTCAGTAATAGGAGGGCTTTTCAAAATTGCTGGAAATAGCAGAGGTTTTCAAAAACCGCCGGGAATAGCGGGGTTTTCAAAACCGCCGAAATAG 786 0.4148 MLSMLQLLRAIPTLLILCFFLIFGNFHNAEARNRHYKWEVKNEYRSPDCFKKLVITINGITPGPTIQAQEGDTVVVQLNNTLMTENLSIHWHEIRQTSIILNDWYHKSTYEQAAELSSIAFQWVGEPQFTKIIRLSIYSVNHLQNQVKLFMLSNLSWNLYSTAALMSLIDSFKDVFKLYVGGIKVSEGILKNVRDKIPAELLKELLRTDGERFLKFPVPQVIKEVVGVSKPSVIGGLFKIAGNSRGFQKPPGIAGFSKPPK* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1483 261 SUPERFAMILY Cupredoxins 27 105 IPR008972 -
Pvu11g1483 261 PANTHER MULTI-COPPER OXIDASE 9 97 IPR045087 -
Pvu11g1483 261 PANTHER MULTI-COPPER OXIDASE 98 129 IPR045087 -
Pvu11g1483 261 Gene3D - 24 144 IPR008972 -
Pvu11g1483 261 Pfam Multicopper oxidase 40 103 IPR011707 GO:0005507
Pvu11g1483 261 Gene3D - 145 225 IPR027433 -
Pvu11g1483 261 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN 9 97 - -
Pvu11g1483 261 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN 98 129 - -
Pvu11g1483 261 SUPERFAMILY Lipoxigenase 141 225 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1483 Pvu-Chr11 34592458 34596013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1483 170 224 Acyl Lipid Metabolism Gene Families AT3G22400 55.357 3.87e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1483 - - pvu:PHAVU_011G143000g 519.62