Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1478 ATGTCTAGGCTATCCTCATCATCACTTCCTGTTTTCCCACAGGATGCCAAACCCAGACACACAGCAAACTTTCATCCTTCCATTTGGGGTGATTATTTCCTTTCCTATGATTCTAGTTTCCATGAAGATGATAGCGACATCAAACAAGTTCCACTGTTGAAAGAATATGTGAGGAAGATTATTGTCTCTCCTGTTGATAACAATTTCCTTTTCAAATTGAACTTCATCAACTCAGTCCAGCGTTCGGGTGTTTCTTATCATTTTGAACATGAAATTGATGAAGCATTGCATCAAATCTATGAGATTTCAACAAAGGAGAATAACATAGTAAGTTACGATGATGATCTTCATCATCTCGCTTTGCTCTTTCGCTTGCTTAGACAACAAGGATATCGCATTTCATCAGATGTATTTTACAAATTCAAGGACCAAGAAGGAAACTTCAAGGAAAGCATTCTGAATGATATAGAAGGAATGTTAAGCTTGTATGAAGCAGCCCAATTAAGCTTCCATGGAGAAGAGATACTGCAAGAAGCATACAGTTTTACTCTCACTCAGTTAACTGAGTCATTAACCACCAAATTAAGCCCATTTCTTTCTGGGTTAGTGCACCATAGCTTAGGACAATCACTTCGCAAGGGAATGCCTAGGTTAGAATCAAGATATTATATATCATTCTATCAAGAAGATCCTTCACATGATGAACGTTTGTTAACCTTTGCAAAACTAGATTTTAATATGTTACAGAAGCTCCATCAAAAAGAAGTCAGCAATGTGACCAAGTGGTGGGTTAAAGATTTGAATGTCTCCACAAATTTTCCTTTTGCACGAGATAGGATTGTGGAAGCTTGCTTTTGGATTGTTGGTGTCTATTATGAACCACAATATTTTCTTGCTAGAAGAATACTAATGAAAGTAATAGCCATATCATCCATCATTGATGATGTGTATGATGCCTATGCAACCATTGATGAGATAGAGATTTTCACCAATGCAATAGAAAGGTGGGATATCTCCGCACTGATTGATCTACCAGAATATATGAAATTATGTTATAAGGCACTTTTGGATATCTTTGAAGAAACAGAGCAGGAGTTGAGAAATCAAGGAAAAGAAAACTTCGTGAAGTATGCTAAAAATGAAGTGAAACGATTGGTCCAAGCCTACCGTACTGAGTCACGATGGTTTCATCACAACCACACACCAACAGCAGAGGAGTACATGGAAGTTGCAACTATGTCATGTGGTTTTGCTTTGTTGACAACTGTATCTTTCTTGGGTATGGAAGATACTGCAGAGGAGTTCCTCATATGGGCAACCAGTGACCCAAAAATTATTGTAGCTGCTTCAACTATTTCCAGAATCATGGATGACATTGCTGGAAGTGAGTTTGAACATGAAAGAGGACACGTTGTCTCAAGCCTTGATTGCTATATGAAGCAATATAATAGCTCAAAGGAAAATGGCATTAAAGAACTGCTTAAGATGGTGGAGAGTAGTTGGAAGGACATTAATGAAGAATGCCTTAATCCTACTCAAGTACCAATGAAGTTTCTCATGCGTGTTGTCAACCTTGCACGAATGATGGACGTACTTTACAAAGAACAAGATAGTTATACACATTCAGGAGGAATATTGAAGGATTATATCAATACTTTACTAGTTCATAAGGTGCCCATACAAATAAGCTAA 1692 0.3747 MSRLSSSSLPVFPQDAKPRHTANFHPSIWGDYFLSYDSSFHEDDSDIKQVPLLKEYVRKIIVSPVDNNFLFKLNFINSVQRSGVSYHFEHEIDEALHQIYEISTKENNIVSYDDDLHHLALLFRLLRQQGYRISSDVFYKFKDQEGNFKESILNDIEGMLSLYEAAQLSFHGEEILQEAYSFTLTQLTESLTTKLSPFLSGLVHHSLGQSLRKGMPRLESRYYISFYQEDPSHDERLLTFAKLDFNMLQKLHQKEVSNVTKWWVKDLNVSTNFPFARDRIVEACFWIVGVYYEPQYFLARRILMKVIAISSIIDDVYDAYATIDEIEIFTNAIERWDISALIDLPEYMKLCYKALLDIFEETEQELRNQGKENFVKYAKNEVKRLVQAYRTESRWFHHNHTPTAEEYMEVATMSCGFALLTTVSFLGMEDTAEEFLIWATSDPKIIVAASTISRIMDDIAGSEFEHERGHVVSSLDCYMKQYNSSKENGIKELLKMVESSWKDINEECLNPTQVPMKFLMRVVNLARMMDVLYKEQDSYTHSGGILKDYINTLLVHKVPIQIS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1478 563 Gene3D Farnesyl Diphosphate Synthase 26 548 IPR008949 -
Pvu11g1478 563 Gene3D - 67 233 IPR036965 GO:0010333|GO:0016829
Pvu11g1478 563 Pfam Terpene synthase family, metal binding domain 238 503 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu11g1478 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 25 233 IPR008930 -
Pvu11g1478 563 SFLD Isoprenoid Synthase Type I 235 558 - -
Pvu11g1478 563 PANTHER TERPENE SYNTHASE 2-RELATED 16 540 - -
Pvu11g1478 563 Pfam Terpene synthase, N-terminal domain 28 207 IPR001906 GO:0010333|GO:0016829
Pvu11g1478 563 SUPERFAMILY Terpenoid synthases 233 560 IPR008949 -
Pvu11g1478 563 Coils Coil 352 372 - -
Pvu11g1478 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 235 558 IPR034741 -
Pvu11g1478 563 PANTHER OS04G0344100 PROTEIN-RELATED 16 540 - -
Pvu11g1478 563 CDD Terpene_cyclase_plant_C1 19 556 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1478 Pvu-Chr11 34206138 34211047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1478 K15803 - gmx:100801358 897.886