Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1474 ATGAAGAATCTCTATAAAGTAACAATAATGTTATCATCAATGATGATGTTTCTTTTTGGCACAACACACTCAATTGTTGTAGAGTCTAATGAAAGTTATATCAAATCAGCTACTTTTTTGTCCGAAAAGTTTGAAGTGGGACCAGGAAAAATTGTAGTGAAAACACTATTAGATATTGACTTTCCAAAGGGTCACATTGGGGTCAAGAGTTTTGATGTTGAAGTAGTTGATGAAGATGGTAAATCTGTACCTTTGTATGAAACTTACCTTCATCATTGGTTTGCTGTAAAATATATTGAAAATATTACCATGTCACACTACATTAAAAAATCTCACGACCTTCGCAATGGTATCGAATTCGAAAGAAATGATGGTATGTGCCAAGGTTTTTTGCTTCCACATTATTGGGGCTTGGGAGGAGAATCACGAGGAACATCCTCAAATCTTCCAGATCCTTTTGCAGTTGAATTAGGTAATCCTACAAAATTAAAGGATGGGTTTAAAGAAAAATGGTTATTTAGCATCATGGTTATTGATACCCGTGGCACACATGATAGAAAAGGTTGTACAGAGTGTAGGTGTAAGCTTTTAAATCTCCCAAACAACTTTTACAATGTCACAATGGGAATTAATGGTCAATTATTGCCAAGAAATTATAAAGGAGGACTCTTTTGTTGTCAAGATAAATTACAATGCAAATTAAGAAATGATTTCCAAGGCCCAACAAGAAATCTTTCCCTAAGATACAAGATAAGGTGGGTTGATTGGATGAACACCAGGTGCCTCTTAGAATATACTATTCCAAGAAATCATGACAGTGTCTCCCCTCACGTTAAGAAAGCAAACATCCCAATGACAAAAGGTGGTTATCTTATATATGGCACCGCTCATATGCACACTGGTGTTGTCAATTCTACTTTATATGGACAGGATGGAAGGGTTTTATGCACTTCAAATCCAAAATATGGAACAGGAAAAGAAGCAGGAAATGAAAATGGTTACCTAGTTGGAATGTCAGTTTGCTATCCAAAACCTGGTTCTATCAAGATTAAAGACGGTGAAATTCTAACATTAGAATCCATATACGAAAACAAGTTTCGTACTGGGGCTATGGGGCATTTCTATATTTACTTGGCAGATCAAATACCGAACAAAGATTTGAATATTTGA 1170 0.3538 MKNLYKVTIMLSSMMMFLFGTTHSIVVESNESYIKSATFLSEKFEVGPGKIVVKTLLDIDFPKGHIGVKSFDVEVVDEDGKSVPLYETYLHHWFAVKYIENITMSHYIKKSHDLRNGIEFERNDGMCQGFLLPHYWGLGGESRGTSSNLPDPFAVELGNPTKLKDGFKEKWLFSIMVIDTRGTHDRKGCTECRCKLLNLPNNFYNVTMGINGQLLPRNYKGGLFCCQDKLQCKLRNDFQGPTRNLSLRYKIRWVDWMNTRCLLEYTIPRNHDSVSPHVKKANIPMTKGGYLIYGTAHMHTGVVNSTLYGQDGRVLCTSNPKYGTGKEAGNENGYLVGMSVCYPKPGSIKIKDGEILTLESIYENKFRTGAMGHFYIYLADQIPNKDLNI* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1474 389 PANTHER STRESS UP-REGULATED NOD 19-RELATED 6 258 - -
Pvu11g1474 389 PANTHER STRESS UP-REGULATED NOD 19-RELATED 260 384 - -
Pvu11g1474 389 Pfam Stress up-regulated Nod 19 34 259 IPR011692 -
Pvu11g1474 389 Pfam Stress up-regulated Nod 19 259 381 IPR011692 -
Pvu11g1474 389 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 260 384 IPR011692 -
Pvu11g1474 389 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 6 258 IPR011692 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1474 Pvu-Chr11 34077803 34079380 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1474 - - pvu:PHAVU_011G142100g 818.15