Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1461 ATGGAGTCGATCATGGCAAAAGCTCTGGAGTACACTCTCAAGTACTGGCTCAAATCGTTCACCCGAGACCAGTTCAAGTTGCAGGGTCGCACTGTTCAGCTTTCAAATCTAGATTTGAATGGAGATGCGTTACATTCCAGCTTTGGATTTCCACCCGTGCTCAGTGTCACCACGGCCAGAGTTGGCAAATTGGAGATCATGTTGCCGTCTATGAGCAATGTACAGACAGAGCCGTTCATCGTGCAAATTGATAGGCTAAATTTGGTTCTTGAAGAGAATTCTGAATTTCAGCCATCTGAAAATCCAACCAGTTGCACGACATCAAGTTCCTCCTCAAAAGGTAGCGGCTATGGTTTTGGGGATAAGATTGCAGATGGAATGACTGTACAGATTCATACAGTTAATTTGTTACTTGAAACTCGTGGAAGTGCTTGTTGCCAAGGAGGAGCAACTTGGACACCACCTATGGCATCTATCACCATGCACAACTTTTTACTGTATACCACAAATGAAAGCTGGGAGGTTGTAAATCTTAAAGAGGCACGGGAATTCTCCAGTAATAAGAAGTATATATACGTTTTCAAAAAACTAGAATGGGAATCTATGTCTTTTGATCTTTTGCCTCATCCTGACATGTTCACGGATGCTACTTTAGGCCGCTCTCAAGAGGGAGAAAACCTAAGAGACGAGGATGGTGCAAAGCGAGTATTGTTTGGAGGAGAGCGTTTAATAGAAGGAATTTCAGGAGAAGCATTTATCACAATTCAGAGAACTGAGTTGAACAGTCCATTTGGACTTGAGGTTCAGTTACATGTCACTGAAGCTGTTTGCCCTGCATTAAGTGAACCAGGATTATATGTCTGTCTAAACAGGGGAAATGTAGATTTAAAGGCTCAGAAGCGATCAACTGAAGCTGCAAGGCATTCTATTGTCTCAATTGTCGTGGACCATATATTTCTTTGCATTAAAGACTCTGAGTTCCAACTTGAGCTTTTAATGCAGTCCCTCCATTTCTCTCGGGTACTTGACAATGTTATTGTGCAGTTCATTCTTCTTCTTCTTCTTTCTCTTGGGCGTTCCCTTGTTCTGAATATTTTGATATTAGATTGTTAG 1113 0.4187 MESIMAKALEYTLKYWLKSFTRDQFKLQGRTVQLSNLDLNGDALHSSFGFPPVLSVTTARVGKLEIMLPSMSNVQTEPFIVQIDRLNLVLEENSEFQPSENPTSCTTSSSSSKGSGYGFGDKIADGMTVQIHTVNLLLETRGSACCQGGATWTPPMASITMHNFLLYTTNESWEVVNLKEAREFSSNKKYIYVFKKLEWESMSFDLLPHPDMFTDATLGRSQEGENLRDEDGAKRVLFGGERLIEGISGEAFITIQRTELNSPFGLEVQLHVTEAVCPALSEPGLYVCLNRGNVDLKAQKRSTEAARHSIVSIVVDHIFLCIKDSEFQLELLMQSLHFSRVLDNVIVQFILLLLLSLGRSLVLNILILDC* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1461 370 MobiDBLite consensus disorder prediction 95 114 - -
Pvu11g1461 370 Pfam N-terminal region of Chorein or VPS13 1 101 IPR026854 -
Pvu11g1461 370 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 341 - -
Pvu11g1461 370 PANTHER UNCHARACTERIZED 1 341 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1461 Pvu-Chr11 33638279 33648378 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1461 - - var:108339272 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1461 11 33638279 33648378 Pvu11g1461 11 33638279 33648378 ECH