Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1459 ATGCTATTTTTTTATTCTACAAGACAGTGCCTTCTACTATGGATTCAGGAGGTGGGGACAGTACAAAAAAAGGACCCTGGATGGAATCACTGTATTTCCATTGATGGGAAATCAAGAAACGTGAAGTGTAAATATTGTGAGAAGATTTTAATTGGGGGTATCTATAGGCTAAAACATCATCTTGCATGCACTTCAAAAAATGTTGGAGCATGTCTTGCTGTTCCAGAAGAAGTTAAAAATTTAATGTTGGGTACTGTTTCTATGCTGCAGCAAAATTTAATAAAAAAATCTATGTTCGAAGTAGACTTGGAAAGCTATGTGAGTGATTCTGAAAATTTTAGAAAAAGACCTTCTCAAGAAGAGAGTGTGGGGGGTGAGTCATCAAGTATTTTCAAGAGAAGAGGAAGTCAAACTACTATCAATTCCATCTTCAAGAAAAGTGAGAGGGAAGATACATGTCAACAAATTTCTTTATTTTTCTACAACAATGCTATTCCCTTTAATGTAGCAAGGAGTGAAGAGTTCACTAAAATGGTTGAAATGATTTCCAAACATGGCCCTGGAATTAAGCCACCATCATACCATGAAATCAGGGTGAAATATTTGAAGCAACAAGTTGAAAAAACCAATCAAATATTGGAAGAACATAGATTATCAAATTACAAAGTAGTTGGAGATCTCTTAATGCAAAAGAGAAGAAAATTGTATTGGACACCATGCGCAACACATTGCATTGATTTAATGTTGGAAGATTTTGAGAAGAAAATACCACTCCATCAGGAGACTATATCAAATGGTAAGAAAATAACAACCTATATCTATTCTAGAACTAGTCTTATTTGCTTGTTGCACAAACATACTGAAGGGATAGATTTAATAAGATCGGCTAATACTCGTTTTGCCACTTCTTATTTAACTTTGGGATGTTTAAATGAGAATAAGAAATCACTTATTAGGATGTTTACATCTAAGGAGTGGCAATCTAGTCAGTGTGTAAAGACTAGAGATGGAAGGCTTGTTGAAAATTTGGTATTGAATAAGGGATTCTGGTCAAATATTTTGAATTGTTTAAGGGGTGCTCTTCCCCTAATTAAGGTGTTGCGCATGGTGGATTCTGATGAAAAACCAGCCATGGGTTTTATTTATGAAGAGATGGACCTTGCTAAAGAGAAGATACAAAGTCTCTTCAATGGAGTTAGTAAAAGTTACACTCCACTTTGGGAAATCATTGATCAAAGATGGGACAACCAATTGCATAGGCCATTACATGCTGCAGGCCGTTATCTAAATCCCATTTTGCATTATCATCCGGATTTTAAAGTTGATTATGAGGTGAAACGGGGGATGTATGAATGTTTAGAGAGGATGGGAGGAGACATTGATGAGATAACTAAGATTGATGCCCAAATTGAGGGTTTCAAGAGCAAATCTGGATTTTTGGGTAGTGAAATAGCTCAACGTGCACTAAAAAAAAAACTCCAGCACAGTGGTGGGAACAATATGGTCCACACGAAAAAAAGAAATTGTTTACACCAGAAGACCATGAATGATGTAGTCTTTGTGATGGCTAATTCAAGATTGATGAAGAGGAAGGATGTTAGGAACACAAAAAACTACAACATTGATGAGCTTGCCTCTGATGAAGAATGGACAGTGGAAGATAATGAAGCAAATGATGTTGAACTTATGGATGATTTGGATGAAGTTGGAGAAGTTGAACCTATGGATGATTTGGAGGTTCCTCCAATTGCTGCGGATGATGAAGGTCTTGGCATAGATAACATTAATGAAAATGAAGATCTTGTAGAAGAGAATGATGATTATCCTTTAATTAATATGAAGGATTTCCTTGGATAG 1857 0.3586 MLFFYSTRQCLLLWIQEVGTVQKKDPGWNHCISIDGKSRNVKCKYCEKILIGGIYRLKHHLACTSKNVGACLAVPEEVKNLMLGTVSMLQQNLIKKSMFEVDLESYVSDSENFRKRPSQEESVGGESSSIFKRRGSQTTINSIFKKSEREDTCQQISLFFYNNAIPFNVARSEEFTKMVEMISKHGPGIKPPSYHEIRVKYLKQQVEKTNQILEEHRLSNYKVVGDLLMQKRRKLYWTPCATHCIDLMLEDFEKKIPLHQETISNGKKITTYIYSRTSLICLLHKHTEGIDLIRSANTRFATSYLTLGCLNENKKSLIRMFTSKEWQSSQCVKTRDGRLVENLVLNKGFWSNILNCLRGALPLIKVLRMVDSDEKPAMGFIYEEMDLAKEKIQSLFNGVSKSYTPLWEIIDQRWDNQLHRPLHAAGRYLNPILHYHPDFKVDYEVKRGMYECLERMGGDIDEITKIDAQIEGFKSKSGFLGSEIAQRALKKKLQHSGGNNMVHTKKRNCLHQKTMNDVVFVMANSRLMKRKDVRNTKNYNIDELASDEEWTVEDNEANDVELMDDLDEVGEVEPMDDLEVPPIAADDEGLGIDNINENEDLVEENDDYPLINMKDFLG* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1459 618 MobiDBLite consensus disorder prediction 112 134 - -
Pvu11g1459 618 ProSiteProfiles Zinc finger BED-type profile. 22 78 IPR003656 GO:0003677
Pvu11g1459 618 PANTHER OSJNBA0013A04.12 PROTEIN 226 548 - -
Pvu11g1459 618 PANTHER OSJNBA0013A04.12 PROTEIN 30 222 - -
Pvu11g1459 618 Pfam Protein of unknown function (DUF 659) 219 269 IPR007021 -
Pvu11g1459 618 PANTHER HAT TRANSPOSON SUPERFAMILY PROTEIN 226 548 - -
Pvu11g1459 618 PANTHER HAT TRANSPOSON SUPERFAMILY PROTEIN 30 222 - -
Pvu11g1459 618 Pfam BED zinc finger 27 63 IPR003656 GO:0003677
Pvu11g1459 618 SUPERFAMILY Ribonuclease H-like 218 438 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1459 Pvu-Chr11 33595020 33597377 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1459 - - pvu:PHAVU_011G140600g 1238.02