Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1454 ATGAATCAACGTGGAATTCATGCTACAAAACAAGTTTTTATGGCCCTTGTTAATTCATATGCAGCTTGTGGAAATTTGGAGAAGGCAAAACAGGTAGTTTTGGATCCAAACACACCAAACAACAGCTTAATTGAAATCAAGAGTGTACTTGCTGTAGCTCTTGCATCACATGGGCAATTGTCCGAGGCTTTTCTTGTCTATGAACAAATTAAGAAAGCTGGACATAATTTGGAGCCAAAAGCTGCTACCTGTTTGATTGAAGAGTTGATTCAACATAATGGGGAGTTGGATAAATTACTGCTTCTGCTCAAGGAAGTGAGTGATCTAGACTATTGGGTTGATGGCTGCTTCAAGGTCATCTTGTACTGTGCACGAAACAAGAATTTGAGTTCTGCTATTCTTTTGTTCAAACAACTCAAGGATAAGTTTGAAAATGATGAAATGGTAATGGAAGCCCTTTTTGATGCAGTATTTTCTGCAATTGCAGCGTCTGAGTCCACTCATTTACAGATTGGCCTGGACTTGCTTTGGGCAATCAAGGATGAACTGGACCTTATGCCGTCACGGCAGTGTCTTGATTTTCTTTTGAGTGCTTGTGCCAATGCTAGAGATTTGAACAATGCTCGCTTGATTTGGAGAGAGTACGAAATTGCTGGGTTTCCTTACAATGTATTAAGTTACTTGCGAATGTATCAGGCACTTTTGGCAGCAGGAGATGGTAGCTCTGCAAGCTTAATTCTTAAGAAAATTCCACGAGACGATGCGGAGGTTTGTTCTGTCATAATAGCATGTCAGGAAACATACAGTGCCGTTGACTCTGTAGGAGAGAAGAAAAAGCCGGGAAAAAGTAAAGGAAGAGAGGGCAAAGACCTGAATACTAGTTCCAGTGATATGTGTAGTGTATGA 906 0.4062 MNQRGIHATKQVFMALVNSYAACGNLEKAKQVVLDPNTPNNSLIEIKSVLAVALASHGQLSEAFLVYEQIKKAGHNLEPKAATCLIEELIQHNGELDKLLLLLKEVSDLDYWVDGCFKVILYCARNKNLSSAILLFKQLKDKFENDEMVMEALFDAVFSAIAASESTHLQIGLDLLWAIKDELDLMPSRQCLDFLLSACANARDLNNARLIWREYEIAGFPYNVLSYLRMYQALLAAGDGSSASLILKKIPRDDAEVCSVIIACQETYSAVDSVGEKKKPGKSKGREGKDLNTSSSDMCSV* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1454 301 PANTHER OS02G0132600 PROTEIN 1 278 - -
Pvu11g1454 301 Pfam PPR repeat 13 32 IPR002885 -
Pvu11g1454 301 Pfam PPR repeat 52 74 IPR002885 -
Pvu11g1454 301 PANTHER OS02G0132600 PROTEIN 1 278 - -
Pvu11g1454 301 MobiDBLite consensus disorder prediction 275 301 - -
Pvu11g1454 301 Gene3D Tetratricopeptide repeat domain 116 299 IPR011990 GO:0005515
Pvu11g1454 301 Gene3D Tetratricopeptide repeat domain 1 115 IPR011990 GO:0005515
Pvu11g1454 301 MobiDBLite consensus disorder prediction 275 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1454 Pvu-Chr11 33439077 33446982 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1454 - - pvu:PHAVU_011G140100g 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1454 11 33439077 33446982 Pvu11g1454 11 33439077 33446982 ECH