Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1442 ATGGCTTCTACAACCACCTCCTCCTTATTGTCTCTCACCACTCTCTCCCCACCCTCTTCGTCCCTGTTTTCCACCAAACCCACACATGCAACCCCTATTCCCCGCTTCCACGCGCCTCGCGCGTCTATGTCCGCCGCTCCCTCACCCGCTTACGACTTATCCTCCTTCAGGTTCCAACCCATCAAGGAGTCGATTGTGTCGCGTGAGATGACGCGCCGCTACATGACCGATATGGTCACGCATGCAGACACCGATGTTGTCATCGTTGGTGCTGGATCTGCTGGACTTTCCTGTGCCTACGAGCTCAGCAAGAACCCGGCCATCAATATTGCCATCATCGAACAGTCCGTCAGCCCCGGCGGTGGGGCGTGGCTTGGTGGCCAGCTCTTCTCCGCCATGATAGTGCGTAAGCCAGCTCATATGTTCCTTGACGAGCTTGGTCTTGAGTATGATGAGCAAGACAACTACGTGGTGATCAAGCACGCTGCATTGTTCACTTCTACCATCATGAGCAAGCTCTTGGCTAGGCCAAACGTGAAGCTCTTCAATGCCGTGGCAGCTGAAGATTTGATCGTGAAGGATGGGAAAGTTGGTGGGGTTGTCACTAACTGGGCCTTGGTTTCGATGAACCATGACACTCAATCCTGCATGGACCCCAATGTGATGGAGGCTAAAGTGGTGGTGAGTTCTTGTGGCCATGATGGACCCTTTGGAGCCACTGGGGTGAAGAGGCTCAAGAGCATTGGCTTGATTGATAACGTCCCAGGAATGAAGGCCCTTGACATGAACAAGGCAGAGGATGCCATTGTGAGACTCACTAGGGAGATTGTGCCTGGTATGATTGTTACTGGGATGGAAGTTGCTGAGATTGATGGTGCTCCAAGAATGGGTCCAACATTTGGAGCAATGATGATATCAGGGCAGAAAGCAGCCCATCTGGCTTTGAGATCTTTGGGACTTCCCAATGCTTTGGAATCTGTAGGAAATGTTCATCCTGAGCTTGTCCTAGCTGCTGCTGCTGAATCTGCTGAAACTGCAGATGCTTAA 1047 0.5215 MASTTTSSLLSLTTLSPPSSSLFSTKPTHATPIPRFHAPRASMSAAPSPAYDLSSFRFQPIKESIVSREMTRRYMTDMVTHADTDVVIVGAGSAGLSCAYELSKNPAINIAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHMFLDELGLEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKDGKVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDNVPGMKALDMNKAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLGLPNALESVGNVHPELVLAAAAESAETADA* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1442 348 SUPERFAMILY FAD/NAD(P)-binding domain 46 311 IPR036188 -
Pvu11g1442 348 MobiDBLite consensus disorder prediction 17 41 - -
Pvu11g1442 348 Pfam Thi4 family 67 300 - -
Pvu11g1442 348 Gene3D - 83 318 IPR036188 -
Pvu11g1442 348 Gene3D - 52 82 - -
Pvu11g1442 348 PANTHER THIAMINE THIAZOLE SYNTHASE 2 348 - -
Pvu11g1442 348 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 63 317 IPR002922 -
Pvu11g1442 348 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 2 348 - -
Pvu11g1442 348 PRINTS Adrenodoxin reductase family signature 85 107 - -
Pvu11g1442 348 PRINTS Adrenodoxin reductase family signature 109 122 - -
Pvu11g1442 348 PRINTS Adrenodoxin reductase family signature 253 266 - -
Pvu11g1442 348 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 2 327 IPR027495 GO:0009228
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1442 Pvu-Chr11 33170458 33173104 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1442 K03146 - gmx:547462 565.844