Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1436 ATGGATTCTTCTTCTTTGCACATAGCAATGTTTCCATGGTTTGCCATGGGACATTTAACTCCATTTCTCCACCTCTCCAACAAGTTAGCAAAGAGGGGACACAAAATCTCCTTCTTCATCCCCACAAGAACACAATCCAAGTTAGAGCAATTCAACCTCTTCCCAGATCTGATCACCTTTTTCCCTATCAATGTTCCTCATGTTGAAGGTCTTCCTCATGGTGCAGAAACCACTTCCGATGTGTCTTTTTCTTTAGGTCCACTCATTATGACGGCTATGGACCGCACTGAGAAGGATATAGAGCTTCTCCTCCTAGATTTAAAGCCGCAAATTGTTTTCTTTGACTTCACATATTGGCTACCAAACATCACTTCTCGTTTGGGGATCAAATCCTTTCAATACTTCATTGTTAGCCCTGCCACAGTATCTTACATTAGGTCCCCACAAAGTGATCTTATGCAACCCCCTCCTGGGTATCCTGTGTCATCCATCAAGCTTCATCTGGATGAAGCCAAGTTCCTTGCTTCTAAAAGGAATTGGGAGTTTGGTAGCGGTGTTCTCTTCTATGATCGCTTCGAATATGGTTTAATGCTATCAGATGCAATTGGGTTCAAAGGTTGTAGAGAAATTGAAGGGCCTTATGTTGACTACCTTGCAGAGCAGTTAGGGAAGTCTGTTCTCCTTTCAGGACCCATCATACCTGAGCCACCTAACACTGTTTTGGAGGAAAACTGGAGTGCATGGCTTGGAGGTTTCAAGGATGGTTCTGTGATTTTCTGTGCACTTGGGAGTGAATGGAAACTACCACATGGTCAATTCCAAGAATTGTTGTTGGGTCTTGAACTTACAGGACTTCCATTCTTGGCAGTTGTGAAAGTTCCTGTTGGGTTTGAGACAATTGAAGCTGCACTCCCAGAAGGGTTTAAGGAAGGAGTTGAAGGGAGAGGAATTGTCCACAGTGGATGGATACAACAACAGTTGATTTTGGAGCACTCATCAGTGGGTTGCTTCATAACACACTGTGGAGCTGGTTCATTAACTGAGGCACTAGTGAATAAGTGTCAAATGGTGTTACTACCACAACTAGATGCTGATCATATCATTAATGCAAGGATGATGGGTAGCAACTTGAAGGTTGGGGTTGAAGTGCAGAAGGGTGAAGAAGATGGTTGGTTCACAAAGGAGAGTGTAAGCAAAGCAGTGAAAACTGTGATGGATGAAGAGAATGAGGTTGGCAGAGAAGTCAGGGAAAATCATGCAAAATTGAGGAATTGCTTGGTAAGTCCTGATTTAGAGTCCATTTGTGTTGATAACTTTTGTCAGAAGCTTCAAGATTTACTCAAGTAA 1347 0.4284 MDSSSLHIAMFPWFAMGHLTPFLHLSNKLAKRGHKISFFIPTRTQSKLEQFNLFPDLITFFPINVPHVEGLPHGAETTSDVSFSLGPLIMTAMDRTEKDIELLLLDLKPQIVFFDFTYWLPNITSRLGIKSFQYFIVSPATVSYIRSPQSDLMQPPPGYPVSSIKLHLDEAKFLASKRNWEFGSGVLFYDRFEYGLMLSDAIGFKGCREIEGPYVDYLAEQLGKSVLLSGPIIPEPPNTVLEENWSAWLGGFKDGSVIFCALGSEWKLPHGQFQELLLGLELTGLPFLAVVKVPVGFETIEAALPEGFKEGVEGRGIVHSGWIQQQLILEHSSVGCFITHCGAGSLTEALVNKCQMVLLPQLDADHIINARMMGSNLKVGVEVQKGEEDGWFTKESVSKAVKTVMDEENEVGREVRENHAKLRNCLVSPDLESICVDNFCQKLQDLLK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1436 448 Gene3D Glycogen Phosphorylase B; 2 243 - -
Pvu11g1436 448 Gene3D Glycogen Phosphorylase B; 244 427 - -
Pvu11g1436 448 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 321 408 IPR002213 GO:0008194
Pvu11g1436 448 CDD GT1_Gtf-like 6 423 IPR002213 GO:0008194
Pvu11g1436 448 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 426 - -
Pvu11g1436 448 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 3 445 - -
Pvu11g1436 448 PANTHER GLYCOSYLTRANSFERASE 3 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1436 Pvu-Chr11 32882773 32884119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1436 5 448 Glycosyltransferase AT5G53990 48.552 4.89e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1436 K22794 - gmx:100808470 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1436 11 32882773 32884119 Pvu11g1436 11 32882773 32884119 ECH
Pvu5g0967 5 27913402 27914058 Pvu11g1436 11 32882773 32884119 PCT