Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1417 ATGTCTGAGAAAGACACAGGTTGGGATTTTCACCTCCGAAAGCTCTCTGTCAGTGGCAGAGACTCCAACACCGCCAACGATCCCGCTTCTGATCCTTCCCTTCTTCCTTCCGTGAAGAAGCTTCATGAATTATGCAAGACCGAGAAGTCCGAGGACTTGGTGGCTAGGGTTTATCCTTCCATTAACAAGATTTTCCAGCGGGCTGCCGCTTCCCTCTCTCAATCTCGAACCTCCAATGGCCTTCTTTTGCTTGCAATTCTTCAGTTTTACCTAGACTTTGGGGAGTTTGTTCTTCACGATGCTGATCCTAGTCTTAGGACATTTTTTCGGTCGTGCCTGAGCAGGGAGTTTGCTGATCCTGTTGTTGCAGAAGCAACACTTGAATTTCTCATCAACAACAAGAAGAAGCTTCTAGCTTCCTTCCCTAACTTATTACCTCAGTTTTTTCCGTTGTTGTTAAAGTTGATTGCTTGGAATGGTGAAAGATTAGAGAAACTGTTTTTGAAAGCCTTCCCGGGCTTGATGTCACCTGGGACATTTCTTCCCTTATTTCCATCTTTAGTAGACTTGCCAATTTTGGTAGTAGCATTGGAAAAGGTGGAAAAAACCTCTGGACCGCTAATTGGGAGCAGCATAGCTTCTATTCAGAAAAATACTGCCCCTAAGATGCTACTTGCTCTTATGGATGAGGCATATACTGGTTCAACTATAGAAGATGGTGGAGGTGATTCTGAATATGAGGATAATAGTGCAATTGATGTTGCTGATCCTTTGTTCCTTGAACTTTTAAAGGATGAAAATGATGGCATTGCTGAACGTCCCTGGTCATCTCCAGTGATAGCTGCAATATTACAGGCTTCAGTCAATAGTCCTTACTCTGATAAGCTGAAAGCAGTACTTGGCATGACTCCTCGTCTTCTTGATGTGTACTTCTCCATAGCATTGCATACTGTCAATAATTCTCTGATTTGTGCATTGATTCCCTTGCTTATGTCAAGATTTGCTACAATATTTCCAGACAAAATATTTTCATATGAGGTTCGCAAGCGACTTTTGGAGTTTATGCTCTCTACATTTCAGTGTTCACCAAACTTCATTGCCCTTTTAAAGAAACCTATAATGGACAGACTTGGAGAAGCTTATGACAGCCCAGACAAGACAGAATTAGCCTTGCAACTATGTTGGGCCATCGGAGAGCATGGTGGAGGTGGTGGATCTCACAAAGATGAAGCCCGTGAGCTTTTTGAGAGTCTAGAACTGCTTTTGTATGAAAACCTTTCCTCAAGTCGTGTGGGCATGACACAGGAGGTATCTCTTGGTTCCGATAAGGATACTTACAGAAGGTCATCACAGTCCAGGCTTTTATGTTTTGTTGTGACAGCCATAGCAAAGCTTGCTACACATCATCGAGAGTTAATACCAAGAGCACGAGTATCCTTGGGCAAGGTGGCTCGGTCTCGAATTTCTGATGCTAGAGTATGGAGGCGTGCATGTGATTTCCTGGGTTTGATGAAAGACCCTGCTATATGTTCATCCATATTGGGGCCTTCGCGACCTACACAAGGTACAGCGCAGAAAGTAGGCAGCATAAACTGGAGTGAAGGTTCAACGAAGATGATTGCACATATTCCATTTTACATTCTAGGGGAACAAGAAGGGCCACCTTTTCATGATTTCTCATTTTCAGATATCATTCCCAGAAGATGA 1707 0.4329 MSEKDTGWDFHLRKLSVSGRDSNTANDPASDPSLLPSVKKLHELCKTEKSEDLVARVYPSINKIFQRAAASLSQSRTSNGLLLLAILQFYLDFGEFVLHDADPSLRTFFRSCLSREFADPVVAEATLEFLINNKKKLLASFPNLLPQFFPLLLKLIAWNGERLEKLFLKAFPGLMSPGTFLPLFPSLVDLPILVVALEKVEKTSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGGGDSEYEDNSAIDVADPLFLELLKDENDGIAERPWSSPVIAAILQASVNSPYSDKLKAVLGMTPRLLDVYFSIALHTVNNSLICALIPLLMSRFATIFPDKIFSYEVRKRLLEFMLSTFQCSPNFIALLKKPIMDRLGEAYDSPDKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRVGMTQEVSLGSDKDTYRRSSQSRLLCFVVTAIAKLATHHRELIPRARVSLGKVARSRISDARVWRRACDFLGLMKDPAICSSILGPSRPTQGTAQKVGSINWSEGSTKMIAHIPFYILGEQEGPPFHDFSFSDIIPRR* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1417 568 Pfam AP-5 complex subunit, vesicle trafficking 30 154 IPR028222 GO:0044599
Pvu11g1417 568 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 1 568 - -
Pvu11g1417 568 SUPERFAMILY ARM repeat 39 428 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1417 K19025 - gmx:100796067 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1417 11 31597868 31609856 Pvu11g1417 11 31597868 31609856 ECH