Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1416 ATGAATGCAGCTTCTTTGCACATAGCAATGTATCCATGGTTTGCTATGGGGCATCTAACCCCATTTCTCCACCTTGCCAACAAATTAGCCAAAAGGGGACACAAGATCTCATTCTTCATACCCAAAAGAACACAAGCCAAGTTAGAAAACCTCAACCTTCGCCCAAGTCTCATCACCTTTGTCCCTATCAGTGTTCCTCACGTTGATGGTCTTCCCTGTGGTGCAGAAACTACTTCAGATGTTCCCTCTTCTTTGTTCCCACTTATTGCCTCTGCCATGGATCTCACAGAGAAGGATATTGAACTTCTCCTCCTTGAACTCAAACCACACATTGTTTTGTTTGACTTTGCAACATATTGGCTACCAAACTTGGCTCGTAGGATAGGGATCAAGTCTCTTCAGTACTGGATTATTAGTCCTGCAACAATAGGGTACATGGCATCCCCAGCTAGAAAAAGAGAAGATGACATGAGAAAACCACCTTCAGGGTTTCCTGATTGTTCTGTCAAGCTGCATGAACATGAAGTTAGGTTCTTTGCTGCGTCAAGGAAATTGGAGTTTGGCAATGGTATTCTTCTCTATGATCGTATCTCTATTGGTGCAGACTTGTCAGATCATATTGGATTCAAAGGTTGCAGAGAAATTGAAGGGCCTTACGTGGATTATCTGGAGACGCAGTTTGGTAAGCCTGTTTTGCTTTCAGGTCCTCTTGTGCCTGAGTCATCCAACTCTACTTTGGAAGCAAAATGGGGTGAATGGCTCGGTAGATTCAAGGCTGGTTCAGTGATTTACTGTGCACTTGGAAGTGAAAACTCCTTACAGCAAAACCAATTGAAGGAGTTGGTATTGGGTCTTGAGCTAACAGGAATGCCATTCCTTGCAGCACTTAAGCCCCCTAATGAATTTGAGTCCCTTGAGGATGCTCTCCCAAAAGGGTTCAAAGAAAGGGTTCAAGAAAGAGGGGTTGTATATGGAGGGTGGGTGCAGCAACAATTGATCTTGGCACATCCTTCTGTTGGGTGCTTCATAACACACTGTGGTGCAGCTTCTCTAACTGAGGCACTTGTGAACCAGTGTCAGTTGGTGTTGTTGCCTCGCCTTGGTTCTGATTTCATCATCAACGCAAGAACCATGGGTGAAAAATTGAGGGTAGCAGTGGAAGTAGAGAAAGGTGAAGAAGATGGTTTGTTCACCAAGGAAAGTGTCGGGAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAGCTTGGCAGAGAAGTCAGAGCAAATCACAACAAAGTCAGGAACCTTTTACTAAGTGACAGTTTTGAGTCAACTTGTGTTGATGCTTTCTGTCACAAGCTTCGTGATATAATCTAA 1359 0.4386 MNAASLHIAMYPWFAMGHLTPFLHLANKLAKRGHKISFFIPKRTQAKLENLNLRPSLITFVPISVPHVDGLPCGAETTSDVPSSLFPLIASAMDLTEKDIELLLLELKPHIVLFDFATYWLPNLARRIGIKSLQYWIISPATIGYMASPARKREDDMRKPPSGFPDCSVKLHEHEVRFFAASRKLEFGNGILLYDRISIGADLSDHIGFKGCREIEGPYVDYLETQFGKPVLLSGPLVPESSNSTLEAKWGEWLGRFKAGSVIYCALGSENSLQQNQLKELVLGLELTGMPFLAALKPPNEFESLEDALPKGFKERVQERGVVYGGWVQQQLILAHPSVGCFITHCGAASLTEALVNQCQLVLLPRLGSDFIINARTMGEKLRVAVEVEKGEEDGLFTKESVGKAVKIVMDDENELGREVRANHNKVRNLLLSDSFESTCVDAFCHKLRDII* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1416 452 Gene3D Glycogen Phosphorylase B; 2 252 - -
Pvu11g1416 452 CDD GT1_Gtf-like 6 413 IPR002213 GO:0008194
Pvu11g1416 452 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 2 450 - -
Pvu11g1416 452 Gene3D Glycogen Phosphorylase B; 253 432 - -
Pvu11g1416 452 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 326 413 IPR002213 GO:0008194
Pvu11g1416 452 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 433 - -
Pvu11g1416 452 PANTHER GLYCOSYLTRANSFERASE 2 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1416 Pvu-Chr11 31593884 31595529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1416 3 452 Glycosyltransferase AT5G54010 48.337 2.09e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1416 K22794 K12933 gmx:100820538 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1416 11 31593884 31595529 Pvu11g1416 11 31593884 31595529 ECH
Pvu5g0968 5 27914194 27921400 Pvu11g1416 11 31593884 31595529 PCT
Pvu11g1416 11 31593884 31595529 Pvu5g0969 5 27934579 27936100 PCT