Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1413 ATGGACGGACCAAAGTTTCAGTTGCACATAGCAATGTACCCATGGTTTGCTATTGGACACATATCAGCATATCTCCACCTAGCCAACAAATTAGCCAAAAGAGGACACAAAATTTCCTTCATCGTACCCAAACTAACAAAGTCCAAGGTGGAACATTTCAACCTCTATCCACAGTTAGTAACCTTCATCCCCATCACCATGCCCCTAGTTGATGGCCTTCCTCCTCATGCAGAAACCACTTTTGATGCTACCATCTCCTTAGGCAAACTCATTATGACTGGGATGGATCGCACTGAGAAGGATATCGAACTACTTTTGCTTGAGCTAAAACCCAACATTGTTTTCTTTGATTATACATGTTGGATGCCGAACTTGGCTCGGAGCTTAGGGATCAAGTCTGTTCATTACATAACCCTAAGCATGATATTTGAATCGTACATGGAATGCATGGAGAAGCAATTTAGTGAAAAGAATATAGCTGAACATGAGCTGAATCTGTTGAATCCTCCAGCTGGGTTCCCAGATCCTTCCATCAAGCTTCAGGCTCACGAGGTTCGACAACTAACTTCAGTCGTGAATTCCGAATTTGGCAGTGGTGTTCGTTATTATGACCGCATCAGCACCAGCACCAGATTGTCCGATGCAGTGGCCTTTAGAGGCTGTAGAGAAATTGAGGGACTATATGCTGACTTTCTAGAAATTTCTTATGGAAAGCCTTTGTTGCTTTCAGGGCCTGTCATACCTGAGCCACACACATCCCCTTTGGAAGAAGAATGGGCTGAATGGCTTTCAGGATTCAAGGAGGAATCGGTGGTGTACTGTGCATTTGGAAGTGAATGCAGGCTACATCAAGATCAGCTCAAGGAACTGTTGGTGGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCTCTTAAAGCCCCTATTGGATTTGAGTCTGTTGAAGCAGCTATGCCAAAAGGGTTCAGTGAGAGGGTTCGAGGAAGAGGCATTGTTCATGGCAGTTGGGTTCAGCAGACACTAATTCTTGACCACCCTTCTATAGGGTGCTTCATTACCCATTGTGGGGTTGCATCTTTACTTGAGGCACTTGTGAGCAATTGTCAGATTGTGGTGTTACCAAATTTTATTGATCAGCTCCTTAATGCGAGGATGATAAGCAGCAGCATAAAGGCTGGTGTTCAAGTGGAGAAAGGTGAAGAAGACGGTTTGTTCACAAAGGAAAGTGTCTGTGCAGCTGTTAAGACTGTGATGGATTTGGAGAGTGAGGTTGGAAGGGAGGTCAGAGAAAACCATTTAAAATTGAGAAATCTCTTACTCACCAAAGATTTGGAGAACACATACCTTGATGGTTTTTGTCAAAAGCTTCAAGAACTAGTTGGGTGA 1386 0.4372 MDGPKFQLHIAMYPWFAIGHISAYLHLANKLAKRGHKISFIVPKLTKSKVEHFNLYPQLVTFIPITMPLVDGLPPHAETTFDATISLGKLIMTGMDRTEKDIELLLLELKPNIVFFDYTCWMPNLARSLGIKSVHYITLSMIFESYMECMEKQFSEKNIAEHELNLLNPPAGFPDPSIKLQAHEVRQLTSVVNSEFGSGVRYYDRISTSTRLSDAVAFRGCREIEGLYADFLEISYGKPLLLSGPVIPEPHTSPLEEEWAEWLSGFKEESVVYCAFGSECRLHQDQLKELLVGLELTGFPFLAALKAPIGFESVEAAMPKGFSERVRGRGIVHGSWVQQTLILDHPSIGCFITHCGVASLLEALVSNCQIVVLPNFIDQLLNARMISSSIKAGVQVEKGEEDGLFTKESVCAAVKTVMDLESEVGREVRENHLKLRNLLLTKDLENTYLDGFCQKLQELVG* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1413 461 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 7 458 - -
Pvu11g1413 461 PANTHER GLYCOSYLTRANSFERASE 7 458 - -
Pvu11g1413 461 Gene3D Glycogen Phosphorylase B; 5 261 - -
Pvu11g1413 461 ProSitePatterns UDP-glycosyltransferases signature. 336 379 IPR035595 -
Pvu11g1413 461 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 7 458 - -
Pvu11g1413 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 444 - -
Pvu11g1413 461 CDD GT1_Gtf-like 8 436 IPR002213 GO:0008194
Pvu11g1413 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 251 421 IPR002213 GO:0008194
Pvu11g1413 461 Gene3D Glycogen Phosphorylase B; 262 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1413 Pvu-Chr11 31458570 31460415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1413 3 460 Glycosyltransferase AT5G54010 45.098 5.88e-149 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1413 K22794 - aprc:113859656 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1413 11 31458570 31460415 Pvu11g1413 11 31458570 31460415 ECH
Pvu5g0969 5 27934579 27936100 Pvu11g1413 11 31458570 31460415 PCT