Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1396 ATGGAGTTGGAAAGAATGCATGAGTTCTTCAAGGGAAAGACCATTTTAATGACAGGCACAACGGGCTTCTTAGCAAAAGTTTTCTTGGAAAAGATTTTGAGAACCCAACCCCAAATACACAAATTGTATCTTCTCGTACGAGCACAGACCAGTGATTTGGCTGCACAGCGCTTTCAAAATGAGGTCATTCACACTGATTTATTTAGAGTGTTACGAGACCAATGGGGCAAAGATTTTGATTCTTTCATTTCCAAGAAGATTGTGGTCATATCAGGAGATGTTTCTCTCCATAATTTTGGTATGGAAGATGAACAACTCAAGATTAAGATGATTGAAGAGATCAACATTTTTATGAATTTTGCAGCAACAACCAAATTTGACGAGAGATTTGACATCTCAATGGAGGTAAATACAATGGGTGTCTTACATGTCTTAAACTTCGCAAAGCATTGTCCTGAGATAAAGATTTTTGTGCAGATATCAACTGCATATGTGTGTGGAGAGATTAAGGATGAAAAGACAATTATGCTAGAGAAACCCTTTGAGATGGGTCAGACCTTGAAAGAGACCTCGAAATTAGACATAACTACAGAAATGAATCTGTTGAAGAAAAAGATAGATGAACTTCGATCAAAGAATGCTACTGAAAACACAATCAAACATGCATTGAAAGATTATGGAATTGAGAGAGCAAAGTTGTATGGTTGGCCAAACACATACACATTCACAAAAGCAATGGGAGAGATGCAATTGGTTCATCATAAAGAGAATGTTCCACTAATCATTATACGTCCCACCATGGTTACTAGTACTCTTAAGGACCCATTTCCTGGTTGGATTGAAGGCTTGAGAACTCTCGACAGCATAATATGTAGCATTGGTCAAGGGAAAATAACAAGCTTTCTTGGTCATCCCAAGACAATTTTGGATATAATACCTGCGGACATGGTTATCAATTGTATGATGACAACAATTGTTGCTTGTTCAAATCAAACTCCTGAGAATTTCATCTACCACATCTCATCATCATTAAGAAATCCATTCAGAATTGTTGATGCTCGTGATTACAGCTATTATTATTTCATTAAATTTGCGCTCGAAAACAAAAATGGAAAGCCAATAATAGTGCCCAAGCCAACTTTGATATCAAGTAGGGCTGTTTTTGACATTTACATGACACTTCGATATGTTTTTCCTCTAAAGGTCCTAAATGTGGTGAACAAAGCATTTTGTCAATGCTCTCAAGATGTTTACGATGATAGCTACAAAAAATTCAAAAGGGTGACACGACTAGTTGAAGTATACAAACCATACCTGTTTTTTAAGGGCATCTTTGATGATTCAAACACTCAAAATTTACGAAGAGCAACAAGTAATAACATTGAGGTTGCTGGATTGAACATTGACCCTAATAGCATCGATTGGGAAGACTACATGGTGAACACACACATTCCTGGTCTTATAAAGTATGCGTTGAAATGA 1482 0.3671 MELERMHEFFKGKTILMTGTTGFLAKVFLEKILRTQPQIHKLYLLVRAQTSDLAAQRFQNEVIHTDLFRVLRDQWGKDFDSFISKKIVVISGDVSLHNFGMEDEQLKIKMIEEINIFMNFAATTKFDERFDISMEVNTMGVLHVLNFAKHCPEIKIFVQISTAYVCGEIKDEKTIMLEKPFEMGQTLKETSKLDITTEMNLLKKKIDELRSKNATENTIKHALKDYGIERAKLYGWPNTYTFTKAMGEMQLVHHKENVPLIIIRPTMVTSTLKDPFPGWIEGLRTLDSIICSIGQGKITSFLGHPKTILDIIPADMVINCMMTTIVACSNQTPENFIYHISSSLRNPFRIVDARDYSYYYFIKFALENKNGKPIIVPKPTLISSRAVFDIYMTLRYVFPLKVLNVVNKAFCQCSQDVYDDSYKKFKRVTRLVEVYKPYLFFKGIFDDSNTQNLRRATSNNIEVAGLNIDPNSIDWEDYMVNTHIPGLIKYALK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1396 493 CDD FAR-N_SDR_e 13 361 - -
Pvu11g1396 493 Coils Coil 192 212 - -
Pvu11g1396 493 Pfam Male sterility protein 396 493 IPR033640 -
Pvu11g1396 493 Gene3D - 5 370 - -
Pvu11g1396 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 490 IPR026055 GO:0080019
Pvu11g1396 493 CDD FAR_C 422 492 IPR033640 -
Pvu11g1396 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 326 IPR036291 -
Pvu11g1396 493 PANTHER FATTY ACYL-COA REDUCTASE 2 490 - -
Pvu11g1396 493 Pfam Male sterility protein 18 321 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1396 Pvu-Chr11 30835269 30839794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1396 8 402 Acyl Lipid Metabolism Gene Families AT5G22500 49.495 3.46e-142 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1396 K13356 - gmx:100793736 522.702