Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1376 AGGCAGAAGGGTGCAGTTACACCCGTGAAGGACCAAGGTCAATGTGGATGTTGTTGGGCGTTTTCAGCGGTTGCAGCAACTGAAGGAATCCATGCACTGACTTCTGGAAAATTGATCTCTTTGTCAGAACAAGAACTTGTTGACTGTGACACAAAAGGTGTGGACCAAGGGTGTGAAGGTGGTTTTATGGATGATGCTTTCAAATTCATCATAAAAAATCATGGAATAAACACTGAAGTGAATTACCCCTATAAGGGTCTGACTTTCAGTTTTACAAGAGTGGTGTGTTCAGTGGTTCGTGTGGAACTGAGTTGGATCACGGTGTGA 327 0.4373 RQKGAVTPVKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQELVDCDTKGVDQGCEGGFMDDAFKFIIKNHGINTEVNYPYKGLTFSFTRVVCSVVRVELSWITV* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1376 108 Pfam Papain family cysteine protease 1 87 IPR000668 GO:0006508|GO:0008234
Pvu11g1376 108 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1 88 - -
Pvu11g1376 108 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 12 23 IPR000169 -
Pvu11g1376 108 PANTHER SENESCENCE-SPECIFIC CYSTEINE PROTEASE SAG39-LIKE 1 88 - -
Pvu11g1376 108 SUPERFAMILY Cysteine proteinases 1 97 IPR038765 -
Pvu11g1376 108 CDD Peptidase_C1A 1 86 IPR039417 -
Pvu11g1376 108 Gene3D Cysteine proteinases 1 106 - -
Pvu11g1376 108 SMART pept_c1 1 107 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1376 Pvu-Chr11 30038620 30039030 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1376 - K16292 pvu:PHAVU_011G132900g 227.254