Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1375 CTTGTTGATTGTGACACAAAGGGTGTGGACCAAGGTTGTGAAGGTGGTCTTATGGATGATGCTTTCAAATTCATCATCCAAAATAACGGACTCAATACTGAAGCCAATTACCCTTTCAAGGGCGTTGATGGAACCTGCAATGCAAAGGCGGCATCTAGTCATGCAGCTACCATTCGAGGCTACGAGGATGTCCCAGCCAACAATGAGAAGGCACTGCAAAAAGCTGTAACCAATCAACCAGTTTCTGTAGCAATTGATGCTAGTGGCTCTGACTTTCAATTTTACAAGAGTGGTGTCTTCACTGGTTCATGTGGAACAGAGTTGGATCACGGTGTCACTGCAGTGGGATATGGTGTCAGCGATGATGGAACTGAGTATTGGTTGGTTAAGAACTCATGGGGAACTGAGTGGGGTGAAGAAGGCTACATTAGGATGCAAAGGGGTGTAGATTCTGAAGAAGGACTGTGTGGCATAGCCATGCAAGCATCGTACCCCACTGCATAA 504 0.4623 LVDCDTKGVDQGCEGGLMDDAFKFIIQNNGLNTEANYPFKGVDGTCNAKAASSHAATIRGYEDVPANNEKALQKAVTNQPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSDDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEEGLCGIAMQASYPTA* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1375 167 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1 166 - -
Pvu11g1375 167 CDD Peptidase_C1A 1 165 IPR039417 -
Pvu11g1375 167 PANTHER - 1 166 - -
Pvu11g1375 167 Pfam Papain family cysteine protease 1 166 IPR000668 GO:0006508|GO:0008234
Pvu11g1375 167 SUPERFAMILY Cysteine proteinases 1 167 IPR038765 -
Pvu11g1375 167 Gene3D Cysteine proteinases 1 167 - -
Pvu11g1375 167 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 108 118 IPR025660 -
Pvu11g1375 167 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 126 145 IPR025661 -
Pvu11g1375 167 SMART pept_c1 1 166 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1375 Pvu-Chr11 29995341 29995846 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1375 - K16292 gmx:102666929 329.717