Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1366 ATGGTTTCAAAAAATCAATTCTATCATATTTCATTGGCGTTGCTTTTCTGCATGGGATTCTGGGGTTTTCAAGTCACATGTCGCACTCTCCAAGATGATGTCTCCATGTATGAGAGGCATGAAGAATGGATGACTCGTTATGGCAGTGTGTACAACGACCCTGAGGAAAGGGAAAAGCGTTTCAGGATATTAAAAAAAAATGTGAATTATATTGAAACCTTCAACAATGCTGCCAATAAACCTTACCAGCTAGGCACTAATCAATTTGCAGACCTCACCAACGAGGAATTCATAGCAGGCAGAAACAGGTTCAAGGGGCACATGTGTTCCTCAATCCTAAGGACAACCACTTTTAAGTATGAAAATGTGACTGCAATTCCGTCCACAGTAGACTGGAGGCAGAAGGGTGCAGTTACACCCGTGAAGGACCAAGGTCAATGTGGATGTTGTTGGGCGTTTTCAGCGGTTGCAGCAACTGAAGGAATCCATGCACTGACTTCTGGAAAATTGATCTCTTTGTCAGAACAAGAACTTGTTGACTGTGACACAAAAGGTGTGGACCAAGGGTGTGAAGGTGGTTTTATGGATGTGAATTACCCCTATAAGGGTGTAGATGGAAAGTGCAATGCAAAGGCAGAAGCGGTGAATGGTGCAACCATTACTGGGTACGAAGATGTCCCCGTTAACAACGAAAGCGCCCTTGAGAAAGCTGTTAGCAGTCAACCAGTTTCTGTAGCAATTGATGCCAGTGGATCTGACTTTCAGTTTTACAAAAGTGGTGTGTTCAGTGGTTCGTGTGGAACTGAGTTGGATCACGGTGTGACTGCTGTGGGATATGGTGTTAGCGATGATGGGAAGAAGTATTGGTTGGTAAAGAACTCATGGGGAACAGAATGGGGTGAAGAAGGCTACATTAGGATGCAAAGAGATGTAGCTGCTGCAGAAGGACTCTGTGGGATAGCGATGATGGCATCTTATCCTACTGCATGA 990 0.4444 MVSKNQFYHISLALLFCMGFWGFQVTCRTLQDDVSMYERHEEWMTRYGSVYNDPEEREKRFRILKKNVNYIETFNNAANKPYQLGTNQFADLTNEEFIAGRNRFKGHMCSSILRTTTFKYENVTAIPSTVDWRQKGAVTPVKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQELVDCDTKGVDQGCEGGFMDVNYPYKGVDGKCNAKAEAVNGATITGYEDVPVNNESALEKAVSSQPVSVAIDASGSDFQFYKSGVFSGSCGTELDHGVTAVGYGVSDDGKKYWLVKNSWGTEWGEEGYIRMQRDVAAAEGLCGIAMMASYPTA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1366 329 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Pvu11g1366 329 PRINTS Papain cysteine protease (C1) family signature 272 282 IPR000668 GO:0006508|GO:0008234
Pvu11g1366 329 PRINTS Papain cysteine protease (C1) family signature 288 294 IPR000668 GO:0006508|GO:0008234
Pvu11g1366 329 SUPERFAMILY Cysteine proteinases 33 327 IPR038765 -
Pvu11g1366 329 SMART pept_c1 126 328 IPR000668 GO:0006508|GO:0008234
Pvu11g1366 329 SMART Inhibitor_I29_2 40 97 IPR013201 -
Pvu11g1366 329 Pfam Cathepsin propeptide inhibitor domain (I29) 40 97 IPR013201 -
Pvu11g1366 329 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 288 307 IPR025661 -
Pvu11g1366 329 Gene3D Cysteine proteinases 23 329 - -
Pvu11g1366 329 CDD Peptidase_C1A 127 327 IPR039417 -
Pvu11g1366 329 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Pvu11g1366 329 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 328 - -
Pvu11g1366 329 Pfam Papain family cysteine protease 126 328 IPR000668 GO:0006508|GO:0008234
Pvu11g1366 329 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 270 280 IPR025660 -
Pvu11g1366 329 PANTHER - 23 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1366 Pvu-Chr11 29707940 29709057 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1366 - K16292 gmx:102666929 588.186