Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1363 ATGTATGAGAGGCATGAAGAATGGATGACTCGTTATGGAAAAGTGTACAAGGACCCTGAGGAAAGGGAAAAGCGTTTCAGGATATTCAAGGAAAATGTGAATTATATTGAAACCTTCAACAATGCTGCCAATAAACCTTACCAGCTAGGCACTAATCAATTTGCAGACCTCACCAACGAGGAATTCACAGCAGGCAGAAACAGGTTGAAGGGGCACATGTGTTCCTCAATCCTAAGGACAACCACTTTCAAGTATGAAAATGTGACTGCAATTCCATCCACAGTGGACTGGAGGCAGAAGGGTGCAGTTACACCCGTGAAGGACCAAGGTCAATGTGGATGTTGTTGGGCGTTTTCAGCGGTTGCAGCAACTGAAGGAATCCATGCACTGACTTCTGGAAAATTGATCTCTTTGTCAGAACAAGAACTTGTTGACTGTGACACAAAAGGTGTGGACCAAGGGTGTGAAGGTGAAAAAAATAATGGAATAAACACTGAAGTGAATTACCCCTATAAGGGTGTTGATGGAAAGTGCAATGCAAAGGCAGAAGCGGTGGATGGTGCAACCATTAATGGGTGCGAAGATGTCCCCGTTAACAACGAGAGCGCCCTTGAGAAAGCTGTTAGCAGTCAACCAGTTTCTCTAGCAATTGATGCCAGTGGATCTGACTTTCAGTTTTACAAGAGTGGTGTGTTCAGTGGTTCGTGTGGAACTGAGTTGGATCACGGTGTGACTGCTGTGGGATATGGTGTTAGTGATGATGGGAGGAAGTATTGGTTGGTAAAGAACTCATGGGGAACAGAATGGGTGTGA 813 0.449 MYERHEEWMTRYGKVYKDPEEREKRFRIFKENVNYIETFNNAANKPYQLGTNQFADLTNEEFTAGRNRLKGHMCSSILRTTTFKYENVTAIPSTVDWRQKGAVTPVKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQELVDCDTKGVDQGCEGEKNNGINTEVNYPYKGVDGKCNAKAEAVDGATINGCEDVPVNNESALEKAVSSQPVSLAIDASGSDFQFYKSGVFSGSCGTELDHGVTAVGYGVSDDGRKYWLVKNSWGTEWV* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1363 270 Gene3D Cysteine proteinases 1 270 - -
Pvu11g1363 270 SUPERFAMILY Cysteine proteinases 2 269 IPR038765 -
Pvu11g1363 270 CDD Peptidase_C1A 92 269 IPR039417 -
Pvu11g1363 270 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 109 120 IPR000169 -
Pvu11g1363 270 PRINTS Papain cysteine protease (C1) family signature 109 124 IPR000668 GO:0006508|GO:0008234
Pvu11g1363 270 PRINTS Papain cysteine protease (C1) family signature 242 252 IPR000668 GO:0006508|GO:0008234
Pvu11g1363 270 PRINTS Papain cysteine protease (C1) family signature 258 264 IPR000668 GO:0006508|GO:0008234
Pvu11g1363 270 Pfam Papain family cysteine protease 91 269 IPR000668 GO:0006508|GO:0008234
Pvu11g1363 270 Pfam Cathepsin propeptide inhibitor domain (I29) 5 62 IPR013201 -
Pvu11g1363 270 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1 269 - -
Pvu11g1363 270 PANTHER - 1 269 - -
Pvu11g1363 270 SMART pept_c1 91 270 IPR000668 GO:0006508|GO:0008234
Pvu11g1363 270 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 240 250 IPR025660 -
Pvu11g1363 270 SMART Inhibitor_I29_2 5 62 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1363 Pvu-Chr11 29670887 29671813 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1363 - K16292 gmx:100800823 488.419