Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1360 ATGGTTACCAAAATTCATTTGTGTCATATTTCACTTGCAATGCTTTTCTGCATGGCGTTCTGCGCTTTACAAGTCACATCTCGCACTCTGCAAGATGCCTCCATCTATGAGAGGCATGAGGAATGGATGGCTCGTTATTCCAGAGTCTACAAGGACCCTCAAGAAAAGGAAAAGCGTTTCAAGATATTCAAGCAAAATATGAATTACATTGAAGCCTTCAACAATGCAGCCAATAAACCTTACAAGCTAGCCATTAATCAATTTGCAGACCTCACCAACGAGGAGTTCATAGCACCAAGAAATAGATTCAAGGGGCACATGTGTTCCTCAATCATAAAGACAACCACTTTTAAGTACGAAAATGTGACATCAGTACCATCCACAGTGGATTGGAGGCAAAAGGGTGCGGTAACACCGGTCAAGGACCAAGGCCAATGTGGTTGTTGCTGGGCGTTTTCTGCTGTTGCATCGGCAGAAGGAATTCATCAACTCACCACTGGAAAATTGATTTCTTTGTCTGAACAAGAACTTGTTGATTGTGACACAAAGGGTGTGGACCAAGGTTGTGAAGGTGGTCTTATGGATGATGCTTTCAAATTCATCATCCAAAATAACGGACTCAATACTGAAGCCAATTACCCTTTCAAGGGCGTTGATGGAACCTGCAATGCAAAGGCGGCATCTAGTCATGCAGCTACCATTCGAGGCTACGAGGATGTCCCAGCCAACAATGAGAAGGCACTGCAAAAAGCTGTAACCAATCAACCA 768 0.4362 MVTKIHLCHISLAMLFCMAFCALQVTSRTLQDASIYERHEEWMARYSRVYKDPQEKEKRFKIFKQNMNYIEAFNNAANKPYKLAINQFADLTNEEFIAPRNRFKGHMCSSIIKTTTFKYENVTSVPSTVDWRQKGAVTPVKDQGQCGCCWAFSAVASAEGIHQLTTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNNGLNTEANYPFKGVDGTCNAKAASSHAATIRGYEDVPANNEKALQKAVTNQP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1360 256 SMART pept_c1 125 256 IPR000668 GO:0006508|GO:0008234
Pvu11g1360 256 Gene3D Cysteine proteinases 23 256 - -
Pvu11g1360 256 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 143 154 IPR000169 -
Pvu11g1360 256 Pfam Cathepsin propeptide inhibitor domain (I29) 39 96 IPR013201 -
Pvu11g1360 256 CDD Peptidase_C1A 126 254 IPR039417 -
Pvu11g1360 256 Pfam Papain family cysteine protease 125 256 IPR000668 GO:0006508|GO:0008234
Pvu11g1360 256 SMART Inhibitor_I29_2 39 96 IPR013201 -
Pvu11g1360 256 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 256 - -
Pvu11g1360 256 PANTHER - 23 256 - -
Pvu11g1360 256 SUPERFAMILY Cysteine proteinases 33 256 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1360 Pvu-Chr11 29623800 29624653 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1360 - K16292 gmx:100800823 466.463